RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CCDC103Q8IW40 242 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 OR52E4Q8NGH9 312 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 ZNF563Q8TA94 476 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 ROPN1LQ96C74 230 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 ZG16BQ96DA0 208 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 NEURL3Q96EH8 262 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 MAGEB18Q96M61 343 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 ZNF317Q96PQ6 595 aaPredicted RBP12.46□□□□□ -0.41
RPP40-201ENST00000319533 OR11A1Q9GZK7 315 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 RMND5AQ9H871 391 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 SLCO1B3Q9NPD5 702 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 TCF7L2Q9NQB0 619 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 SDR39U1Q9NRG7 319 aaPredicted RBP12.46□□□□□ -0.41
RPP40-201ENST00000319533 PARPBPQ9NWS1 579 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 FLVCR1Q9Y5Y0 555 aa12.46□□□□□ -0.41
RPP40-201ENST00000319533 PRAMEF27A3QJZ7 478 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 VWC2LB2RUY7 222 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 RFXANKO14593 260 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 ZNF208O43345 1280 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 EIF1BO60739 113 aaKnown RBP12.45□□□□□ -0.42
RPP40-201ENST00000319533 BMP4P12644 408 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 HTR3AP46098 478 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 MAP2K6P52564 334 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 SEC24CP53992 1094 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 KCNJ10P78508 379 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 TXNL4AP83876 142 aaKnown RBP12.45□□□□□ -0.42
RPP40-201ENST00000319533 HPCAP84074 193 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 SLC25A3Q00325 362 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 CHRNB3Q05901 458 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 SLC17A1Q14916 467 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 SWI5Q1ZZU3 235 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 MST1LQ2TV78 715 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 TNFAIP8L2Q6P589 184 aaPredicted RBP12.45□□□□□ -0.42
RPP40-201ENST00000319533 ZNF621Q6ZSS3 439 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 XAGE5Q8WWM1 108 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 HTRA1Q92743 480 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 PMM1Q92871 262 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 BEX2Q9BXY8 128 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 HEATR1Q9H583 2144 aaKnown RBP12.45□□□□□ -0.42
RPP40-201ENST00000319533 FKRPQ9H9S5 495 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 SLC7A10Q9NS82 523 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.45□□□□□ -0.42
RPP40-201ENST00000319533 SLC9A8Q9Y2E8 581 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 AMDHD2Q9Y303 409 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 ARFGEF3Q5TH69 2177 aa12.45□□□□□ -0.42
RPP40-201ENST00000319533 FAAHO00519 579 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 ANP32DO95626 131 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 KRT75O95678 551 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 IMPDH2P12268 514 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 USF1P22415 310 aaPredicted RBP12.44□□□□□ -0.42
RPP40-201ENST00000319533 RYKP34925 604 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 POLR2JP52435 117 aaKnown RBP12.44□□□□□ -0.42
RPP40-201ENST00000319533 AQP5P55064 265 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 OR2B6P58173 313 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 SLC35A1P78382 337 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 KRTAP24-1Q3LI83 254 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 TSPO2Q5TGU0 170 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 CGB2Q6NT52 195 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 MSANTD1Q6ZTZ1 278 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 CMIPQ8IY22 773 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 RAB8BQ92930 207 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 TMEM45BQ96B21 275 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 ITCHQ96J02 903 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 CCDC28BQ9BUN5 200 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 RABEP2Q9H5N1 569 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 OSGIN1Q9UJX0 560 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 PRDM4Q9UKN5 801 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 ATP23Q9Y6H3 246 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 PMF1-BGLAPU3KQ54 211 aa12.44□□□□□ -0.42
RPP40-201ENST00000319533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.429e-8■■■■■ 29.1
RPP40-201ENST00000319533 MALRD1Q5VYJ5 2156 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 TMED7-TICAM2A0A0A6YYA0 188 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 CLDN24A6NM45 220 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 NDUFS8O00217 210 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 GSNP06396 782 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 DRD4P21917 467 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 MPGP29372 298 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 IDH2P48735 452 aaKnown RBP12.43□□□□□ -0.42
RPP40-201ENST00000319533 GZMKP49863 264 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 IDH3AP50213 366 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 POLR2HP52434 150 aaKnown RBP12.43□□□□□ -0.42
RPP40-201ENST00000319533 TGFBR3Q03167 851 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 GPAT3Q53EU6 434 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 PAQR6Q6TCH4 344 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 CASP12Q6UXS9 341 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 RNF130Q86XS8 419 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 CNOT9Q92600 299 aaKnown RBP12.43□□□□□ -0.42
RPP40-201ENST00000319533 DDIT4LQ96D03 193 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 DNAJA3Q96EY1 480 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 NAA11Q9BSU3 229 aaPredicted RBP12.43□□□□□ -0.42
RPP40-201ENST00000319533 PIF1Q9H611 641 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 UPB1Q9UBR1 384 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 TMED7Q9Y3B3 224 aa12.43□□□□□ -0.42
RPP40-201ENST00000319533 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 AGAP5A6NIR3 686 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 HMGN4O00479 90 aa12.42□□□□□ -0.42
RPP40-201ENST00000319533 AP3D1O14617 1153 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms