RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 FAM25CB3EWG5 89 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 FAM25GB3EWG6 89 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 PLPP2O43688 288 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 HYAL3O43820 417 aaPredicted RBP12.98□□□□□ -0.33
VRK3-201ENST00000316763 IGKV1D-16P01601 117 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 HLA-DQB1P01920 261 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 PRKAR1AP10644 381 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 CEACAM1P13688 526 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 ALAS2P22557 587 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 SLC2A5P22732 501 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 APEX1P27695 318 aaKnown RBP12.98□□□□□ -0.33
VRK3-201ENST00000316763 SSTR4P31391 388 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 INPP1P49441 399 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 HSD17B7P56937 341 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 TRA2AQ13595 282 aaKnown RBP eCLIP12.98□□□□□ -0.33
VRK3-201ENST00000316763 CRMP1Q14194 572 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 QPRTQ15274 297 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 RHBDD2Q6NTF9 364 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 ARL9Q6T311 187 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 LINC00114Q6XXX2 140 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 TPRA1Q86W33 373 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 SMPDL3BQ92485 455 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
VRK3-201ENST00000316763 OR1F2PQ96R84 312 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 CTRCQ99895 268 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 RNF32Q9H0A6 362 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 ADGRL4Q9HBW9 690 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 NEK6Q9HC98 313 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 MCCC2Q9HCC0 563 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 LANCL2Q9NS86 450 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 SRPK3Q9UPE1 567 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 OR10H1Q9Y4A9 318 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 MAU2Q9Y6X3 613 aa12.98□□□□□ -0.33
VRK3-201ENST00000316763 J3QLW9 94 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 TFECO14948 347 aaPredicted RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 PPM1BO75688 479 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 NDUFB2O95178 105 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 MRPL3P09001 348 aaKnown RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 ZNF19P17023 458 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 OR1D4P47884 311 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 INSM1Q01101 510 aaPredicted RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 INSL4Q14641 139 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 RSPO4Q2I0M5 234 aaPredicted RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 ZNF362Q5T0B9 420 aaPredicted RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 IDNKQ5T6J7 187 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 HBMQ6B0K9 141 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 FCRLBQ6BAA4 426 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 ZNF440Q8IYI8 595 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 OR4N2Q8NGD1 307 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 OR6F1Q8NGZ6 308 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 SGTBQ96EQ0 304 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 FRMD6Q96NE9 622 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 ERMAPQ96PL5 475 aaPredicted RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 OR6C1Q96RD1 312 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 TIMP4Q99727 224 aa12.97□□□□□ -0.33
VRK3-201ENST00000316763 PELOQ9BRX2 385 aaKnown RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 SIRT4Q9Y6E7 314 aaPredicted RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 CNOT1A5YKK6 2376 aaKnown RBP12.97□□□□□ -0.33
VRK3-201ENST00000316763 SHISA3A0PJX4 238 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 HTR3EA5X5Y0 456 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 NPIPB9F8W1W9 429 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 CDC123O75794 336 aaPredicted RBP12.96□□□□□ -0.33
VRK3-201ENST00000316763 DKK1O94907 266 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 FTH1P19P0C7X4 201 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 MAP2K3P46734 347 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 NOVA1P51513 510 aaKnown RBP12.96□□□□□ -0.33
VRK3-201ENST00000316763 BTG2P78543 158 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 LGALS3BPQ08380 585 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 BIKQ13323 160 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 ERV3-1Q14264 604 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 DHRS13Q6UX07 377 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 VASH1Q7L8A9 365 aaPredicted RBP12.96□□□□□ -0.33
VRK3-201ENST00000316763 CYB561A3Q8NBI2 242 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 FAM98AQ8NCA5 519 aaKnown RBP12.96□□□□□ -0.33
VRK3-201ENST00000316763 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.96□□□□□ -0.33
VRK3-201ENST00000316763 MRPL48Q96GC5 212 aaKnown RBP12.96□□□□□ -0.33
VRK3-201ENST00000316763 ZNF486Q96H40 463 aaPredicted RBP12.96□□□□□ -0.33
VRK3-201ENST00000316763 C4orf36Q96KX1 117 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 MMP28Q9H239 520 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 RNF121Q9H920 327 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 ZNF304Q9HCX3 659 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 NOX1Q9Y5S8 564 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 CFAP54Q96N23 3096 aa12.96□□□□□ -0.33
VRK3-201ENST00000316763 B4DXG7 233 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 PLA2G10O15496 165 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 CSTAP01040 98 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 NGFRP08138 427 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 TALDO1P37837 337 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 DDOSTP39656 456 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 CLDN6P56747 220 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 ATAD3CQ5T2N8 411 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 PHF19Q5T6S3 580 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 PLET1Q6UQ28 207 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 KIRREL2Q6UWL6 708 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 PAMR1Q6UXH9 720 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 NPSR1Q6W5P4 371 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 MS4A15Q8N5U1 240 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 OR52E2Q8NGJ4 325 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 OR5M3Q8NGP4 307 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 FAM122AQ96E09 287 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms