RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 NKX2-2O95096 273 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 TNFSF15O95150 251 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 EPHA2P29317 976 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 DNASE1L3Q13609 305 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 FAM180AQ6UWF9 173 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 C7orf34Q96L11 122 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 C14orf119Q9NWQ9 140 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 A0A1B0GVG6 124 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 TMEM72A0PK05 275 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 CSO75390 466 aaKnown RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 ERCC1P07992 297 aaPredicted RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 UBE2NP61088 152 aaKnown RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 RNF4P78317 190 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 TRA2AQ13595 282 aaKnown RBP eCLIP12.57□□□□□ -0.4
DDX54-202ENST00000314045 GLYR1Q49A26 553 aaPredicted RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 ZNF554Q86TJ5 538 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 ZNF511Q8NB15 262 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 MINDY2Q8NBR6 621 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 OR5J2Q8NH18 312 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 MUL1Q969V5 352 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 SLC41A2Q96JW4 573 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 GABARAPL1Q9H0R8 117 aa12.57□□□□□ -0.4
DDX54-202ENST00000314045 SIRT3Q9NTG7 399 aaPredicted RBP12.57□□□□□ -0.4
DDX54-202ENST00000314045 CDHR4A6H8M9 788 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 C4orf47A7E2U8 309 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 LRRN3E7EW58 273 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 SYT7O43581 403 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 OR2J2O76002 312 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 WDPCPO95876 746 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 UCHL1P09936 223 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 SLC35A1P78382 337 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 ADPRMQ3LIE5 342 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 OR7E24Q6IFN5 339 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 FAM199XQ6PEV8 388 aaPredicted RBP12.56□□□□□ -0.4
DDX54-202ENST00000314045 ZNF620Q6ZNG0 422 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 LANCL3Q6ZV70 420 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 OR4C3Q8NH37 302 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 ACOT12Q8WYK0 555 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 ZNF350Q9GZX5 532 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 CACNA1HO95180 2353 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 LCATP04180 440 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 PEBP1P30086 187 aaKnown RBP12.56□□□□□ -0.4
DDX54-202ENST00000314045 GMFBP60983 142 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 SNRPGP62308 76 aaKnown RBP12.56□□□□□ -0.4
DDX54-202ENST00000314045 ZXDAP98168 799 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 CAMK2DQ13557 499 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 ZNF704Q6ZNC4 412 aaPredicted RBP12.56□□□□□ -0.4
DDX54-202ENST00000314045 LAT2Q9GZY6 243 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 SLC7A11Q9UPY5 501 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 A0A1W2PQL4 384 aaPredicted RBP12.56□□□□□ -0.4
DDX54-202ENST00000314045 FRG2CA6NGY1 282 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 OR8G3PP0DMU2 310 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 GPR85P60893 370 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 IL11RAQ14626 422 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 ZFP69Q49AA0 526 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 TMEM201Q5SNT2 666 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 DPY19L4Q7Z388 723 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 OR4D9Q8NGE8 314 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 OR1N1Q8NGS0 311 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 FAM71F1Q96KD3 344 aaPredicted RBP12.56□□□□□ -0.4
DDX54-202ENST00000314045 NECAB3Q96P71 396 aaPredicted RBP12.56□□□□□ -0.4
DDX54-202ENST00000314045 OR5M11Q96RB7 305 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 SEMA4CQ9C0C4 833 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 WWTR1Q9GZV5 400 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 ELOVL3Q9HB03 270 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 CHRNA9Q9UGM1 479 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 ZNF221Q9UK13 617 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 AK6Q9Y3D8 172 aaKnown RBP12.56□□□□□ -0.4
DDX54-202ENST00000314045 TTC28Q96AY4 2481 aa12.56□□□□□ -0.4
DDX54-202ENST00000314045 ZNF878C9JN71 531 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 HTR1FP30939 366 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 SYT14P1Q58G82 188 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 ZNF628Q5EBL2 1059 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 FAHD1Q6P587 224 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 SLC35D2Q76EJ3 337 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 Q8N402 240 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 RASD2Q96D21 266 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 PCDHB16Q9NRJ7 776 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 YARS2Q9Y2Z4 477 aaKnown RBP12.55□□□□□ -0.4
DDX54-202ENST00000314045 MEGF11A6BM72 1044 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 STK17BO94768 372 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 OR2T7P0C7T2 308 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 MAGEA2P43356 314 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 CCL11P51671 97 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 MELKQ14680 651 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 TMEM69Q5SWH9 247 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 ZNF782Q6ZMW2 699 aaPredicted RBP12.55□□□□□ -0.4
DDX54-202ENST00000314045 OR2T27Q8NH04 317 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 ZNF566Q969W8 418 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 ERVK13-1Q9NX77 482 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 MOKQ9UQ07 419 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 TRBV5-3A0A0A0MS03 114 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 ZAR1LA6NP61 321 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 PLATP00750 562 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 MT-ATP6P00846 226 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 LINC00271P0C7V0 271 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 EMDP50402 254 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 BIDP55957 195 aa12.55□□□□□ -0.4
DDX54-202ENST00000314045 CLDN17P56750 224 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms