RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 ZFP3Q96NJ6 502 aa19.96■□□□□ 0.79
HOXD4-201ENST00000306324 ZNF426Q9BUY5 554 aa19.96■□□□□ 0.79
HOXD4-201ENST00000306324 CLEC4AQ9UMR7 237 aa19.96■□□□□ 0.79
HOXD4-201ENST00000306324 AURKCQ9UQB9 309 aa19.96■□□□□ 0.79
HOXD4-201ENST00000306324 CLEC18AA5D8T8 446 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 EIF1BO60739 113 aaKnown RBP19.95■□□□□ 0.78
HOXD4-201ENST00000306324 AKR7A3O95154 331 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 MT-ND1P03886 318 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 RNF224P0DH78 156 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 CBLP22681 906 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 AGFG1P52594 562 aaKnown RBP19.95■□□□□ 0.78
HOXD4-201ENST00000306324 C1orf146Q5VVC0 180 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 CLEC18BQ6UXF7 455 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 SLC43A2Q8N370 569 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 CLEC18CQ8NCF0 446 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 TMEM239Q8WW34 195 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 ITLN2Q8WWU7 325 aaPredicted RBP19.95■□□□□ 0.78
HOXD4-201ENST00000306324 PIP5K1AQ99755 562 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 NAA11Q9BSU3 229 aaPredicted RBP19.95■□□□□ 0.78
HOXD4-201ENST00000306324 MAGIXQ9H6Y5 334 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 NMNAT1Q9HAN9 279 aaPredicted RBP19.95■□□□□ 0.78
HOXD4-201ENST00000306324 MAN2C1Q9NTJ4 1040 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 C6orf203Q9P0P8 240 aaPredicted RBP19.95■□□□□ 0.78
HOXD4-201ENST00000306324 DOPEY1Q5JWR5 2465 aa19.95■□□□□ 0.78
HOXD4-201ENST00000306324 FTCDNL1E5RQL4 147 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 CIB2O75838 187 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 H1F0P07305 194 aaKnown RBP19.94■□□□□ 0.78
HOXD4-201ENST00000306324 BMP5P22003 454 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 CTSSP25774 331 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 CHRNB4P30926 498 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 RBM34P42696 430 aaKnown RBP19.94■□□□□ 0.78
HOXD4-201ENST00000306324 UGT2B15P54855 530 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 RNPS1Q15287 305 aaKnown RBP19.94■□□□□ 0.78
HOXD4-201ENST00000306324 IQCCQ4KMZ1 466 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 OTUD3Q5T2D3 398 aaPredicted RBP19.94■□□□□ 0.78
HOXD4-201ENST00000306324 PAQR6Q6TCH4 344 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 CCDC103Q8IW40 242 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF808Q8N4W9 903 aaPredicted RBP19.94■□□□□ 0.78
HOXD4-201ENST00000306324 TMEM99Q8N816 258 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 CNEP1R1Q8N9A8 125 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 CA5BP1Q8WTZ4 195 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 ASB5Q8WWX0 329 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 HS6ST2Q96MM7 605 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 SLC19A3Q9BZV2 496 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 KLHL13Q9P2N7 655 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 TESMINQ9Y4I5 508 aa19.94■□□□□ 0.78
HOXD4-201ENST00000306324 DHRS12A0PJE2 317 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 WIPF3A6NGB9 483 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF814B7Z6K7 855 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 LRRN3E7EW58 273 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 CYTIPO60759 359 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 SIRPAP78324 504 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 H3F3AP84243 136 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 RASGEF1BQ0VAM2 473 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 FGD3Q5JSP0 725 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 XKRXQ6PP77 449 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 YTHDF3Q7Z739 585 aaKnown RBP19.93■□□□□ 0.78
HOXD4-201ENST00000306324 ADGRG5Q8IZF4 528 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 PIK3C3Q8NEB9 887 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 PFN4Q8NHR9 129 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 CANT1Q8WVQ1 401 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 UTP4Q969X6 686 aaKnown RBP19.93■□□□□ 0.78
HOXD4-201ENST00000306324 GMPPAQ96IJ6 420 aaPredicted RBP19.93■□□□□ 0.78
HOXD4-201ENST00000306324 MEPEQ9NQ76 525 aaPredicted RBP19.93■□□□□ 0.78
HOXD4-201ENST00000306324 KLHL9Q9P2J3 617 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 MED31Q9Y3C7 131 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 DOPEY2Q9Y3R5 2298 aa19.93■□□□□ 0.78
HOXD4-201ENST00000306324 A0A1W2PNV4 684 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 DVL2O14641 736 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 RAMP1O60894 148 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 CTBP2P56545 445 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 SPIBQ01892 262 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 LIX1LQ8IVB5 337 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 OR52J3Q8NH60 311 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 PIGXQ8TBF5 258 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 MOGAT1Q96PD6 335 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF347Q96SE7 839 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 KLHL4Q9C0H6 718 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 GLRX2Q9NS18 164 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 SEC14L4Q9UDX3 406 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF629Q9UEG4 869 aaPredicted RBP19.92■□□□□ 0.78
HOXD4-201ENST00000306324 FREM1Q5H8C1 2179 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 ENO4A6NNW6 628 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 CH25HO95992 272 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 BGLAPP02818 100 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 CRHP06850 196 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 RAP2AP10114 183 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 UMPSP11172 480 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 GRPRP30550 384 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 OPRM1P35372 400 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 LTBQ06643 244 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 MFSD13AQ14CX5 517 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 ABLIM2Q6H8Q1 611 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF730Q6ZMV8 503 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 PIWIL3Q7Z3Z3 882 aaKnown RBP19.92■□□□□ 0.78
HOXD4-201ENST00000306324 TUSC5Q8IXB3 177 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 OR6S1Q8NH40 331 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 ACOT11Q8WXI4 607 aaPredicted RBP19.92■□□□□ 0.78
HOXD4-201ENST00000306324 RSRC1Q96IZ7 334 aaKnown RBP19.92■□□□□ 0.78
HOXD4-201ENST00000306324 PSD2Q9BQI7 771 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms