RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TMEM255BQ8WV15 326 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 RSPRY1Q96DX4 576 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SLC41A2Q96JW4 573 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 WDR83Q9BRX9 315 aaKnown RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 NRIP3Q9NQ35 241 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 MT-CO2P00403 227 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 ARG2P78540 354 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 NIPAL3Q6P499 406 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 LRRC18Q8N456 261 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 ZFAND1Q8TCF1 268 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 DUSP19Q8WTR2 217 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 MAP3K3Q99759 626 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 AMBRA1Q9C0C7 1298 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 POM121CA8CG34 1229 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 DPM1O60762 260 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 UBBP0CG47 229 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 UBCP0CG48 685 aaKnown RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SLC9A3R2Q15599 337 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 RTL6Q6ICC9 239 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SFXN4Q6P4A7 337 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 PIGCQ92535 297 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SLAMF9Q96A28 289 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SIDT1Q9NXL6 827 aaKnown RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 A0A0U1RQK1 487 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SERINC4A6NH21 518 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 TMEM212A6NML5 194 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 SLC16A6O15403 523 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 PEX14O75381 377 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 ZNF44P15621 663 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 PKLRP30613 574 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 GDNFP39905 211 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 ATP1B3P54709 279 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 RPL23AP62750 156 aaKnown RBP12.95□□□□□ -0.34
PRKCB-201ENST00000303531 PPP1R35Q8TAP8 253 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 NMNAT3Q96T66 252 aa12.95□□□□□ -0.34
PRKCB-201ENST00000303531 HMX2A2RU54 273 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 TNFRSF10AO00220 468 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 SOCS6O14544 535 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 TM4SF4P48230 202 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 ERVFC1P60507 584 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 RAP2BP61225 183 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 RBMS2Q15434 407 aaKnown RBP12.94□□□□□ -0.34
PRKCB-201ENST00000303531 CCSMST1Q4G0I0 132 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 OR14A16Q8NHC5 309 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 POC1BQ8TC44 478 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 ARID1BQ8NFD5 2236 aaPredicted RBP12.94□□□□□ -0.34
PRKCB-201ENST00000303531 HTRA3P83110 453 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 PPP1R3BQ86XI6 285 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 RLIMQ9NVW2 624 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 SLCO2B1O94956 709 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 MAKP20794 623 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 SLC14A1Q13336 389 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 TMEM31Q5JXX7 168 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 ADAMTSL4Q6UY14 1074 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 CLDN22Q8N7P3 220 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 OR52I1Q8NGK6 324 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 ABHD4Q8TB40 342 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 MIB2Q96AX9 1013 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 SDSLQ96GA7 329 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 DUSP23Q9BVJ7 150 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 SULT1C2O00338 296 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 CHATP28329 748 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 ZNF750Q32MQ0 723 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 TCTEX1D2Q8WW35 142 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 HHIPL1Q96JK4 782 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 MOKQ9UQ07 419 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 PCDHGA1Q9Y5H4 931 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 LILRB5O75023 590 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 VEGFCP49767 419 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 DUSP7Q16829 419 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 MPEG1Q2M385 716 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 CHTF18Q8WVB6 975 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 COPS3Q9UNS2 423 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 TMEM82A0PJX8 343 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 ARNTP27540 789 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 RPS27AP62979 156 aaKnown RBP12.94□□□□□ -0.34
PRKCB-201ENST00000303531 UBA52P62987 128 aaKnown RBP12.94□□□□□ -0.34
PRKCB-201ENST00000303531 FOXK2Q01167 660 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 PLGLAQ15195 96 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 MKXQ8IYA7 352 aa12.94□□□□□ -0.34
PRKCB-201ENST00000303531 NSG1A0A0A6YYJ2 146 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 OR6C6A6NF89 314 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 NKX6-1P78426 367 aaPredicted RBP12.93□□□□□ -0.34
PRKCB-201ENST00000303531 TANGO2Q6ICL3 276 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 TOX2Q96NM4 488 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 TMEM38AQ9H6F2 299 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 SURF4O15260 269 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 SHOXO15266 292 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 MPPED1O15442 326 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 MTNR1BP49286 362 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 YPEL5P62699 121 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 CRMP1Q14194 572 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 GDF7Q7Z4P5 450 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 MKRN2Q9H000 416 aaKnown RBP12.93□□□□□ -0.34
PRKCB-201ENST00000303531 NOX4Q9NPH5 578 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 APEX1P27695 318 aaKnown RBP12.93□□□□□ -0.34
PRKCB-201ENST00000303531 HTR1FP30939 366 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms