RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 PAICSP22234 425 aaKnown RBP20.22■□□□□ 0.83
SMAD1-201ENST00000302085 RPS7P62081 194 aaKnown RBP20.22■□□□□ 0.83
SMAD1-201ENST00000302085 NTRK2Q16620 822 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 ZNF791Q3KP31 576 aaPredicted RBP20.22■□□□□ 0.83
SMAD1-201ENST00000302085 TMEM99Q8N816 258 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 NPEPL1Q8NDH3 523 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 OR9Q1Q8NGQ5 310 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 SPACA9Q96E40 222 aaPredicted RBP20.22■□□□□ 0.83
SMAD1-201ENST00000302085 NPAS1Q99742 590 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 ARHGAP9Q9BRR9 750 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 PTDSS2Q9BVG9 487 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 FKRPQ9H9S5 495 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 ISYNA1Q9NPH2 558 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 ZNF229Q9UJW7 825 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 C9orf172C9J069 976 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 PLD2O14939 933 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 INHBBP09529 407 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 JMJD7P0C870 316 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 CPEP16870 476 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 ENTPD1P49961 510 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 SLC16A1P53985 500 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 RPS18P62269 152 aaKnown RBP20.21■□□□□ 0.83
SMAD1-201ENST00000302085 LIPKQ5VXJ0 399 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 NDUFAF7Q7L592 441 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 CT55Q8WUE5 264 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 RASD2Q96D21 266 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 DNAJA3Q96EY1 480 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 NDUFB11Q9NX14 153 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 KLRF1Q9NZS2 232 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 PCDHGB6Q9Y5F9 930 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 ITGA10O75578 1167 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 PRKCAP17252 672 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 TCN2P20062 427 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 SUMO3P55854 103 aaPredicted RBP20.21■□□□□ 0.83
SMAD1-201ENST00000302085 RPL18Q07020 188 aaKnown RBP20.21■□□□□ 0.83
SMAD1-201ENST00000302085 DGUOKQ16854 277 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 ANKDD1AQ495B1 522 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 ALG10Q5BKT4 473 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 TMEM234Q8WY98 164 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 NMNAT3Q96T66 252 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 HAO2Q9NYQ3 351 aa20.21■□□□□ 0.83
SMAD1-201ENST00000302085 SPIN1Q9Y657 262 aaPredicted RBP20.21■□□□□ 0.83
SMAD1-201ENST00000302085 A0A1W2PQ72 361 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 C12orf71A8MTZ7 269 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 A8MVM7 634 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 IMPA2O14732 288 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 SLC25A12O75746 678 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 IGHEP01854 428 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 HIST1H2ABP04908 130 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 F13BP05160 661 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 CD14P08571 375 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 CD63P08962 238 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 CRYBB2P43320 205 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 HTR3AP46098 478 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 CTXN1P60606 82 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 MOGQ16653 247 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 TIMM50Q3ZCQ8 353 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 ARSKQ6UWY0 536 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 USP43Q70EL4 1123 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 HIST3H2AQ7L7L0 130 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 FAM122BQ7Z309 247 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 PPP1R32Q7Z5V6 425 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 KLHL36Q8N4N3 616 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 ACBD7Q8N6N7 88 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 ZPLD1Q8TCW7 415 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 HIST1H2ACQ93077 130 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 Q96M85 177 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 TIMP4Q99727 224 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 ADGRL4Q9HBW9 690 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 ZNF160Q9HCG1 818 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 TCFL5Q9UL49 500 aa20.2■□□□□ 0.82
SMAD1-201ENST00000302085 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 MASP2O00187 686 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 NUBP1P53384 320 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 TUBA1BP68363 451 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 TPBGQ13641 420 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 TUBA1AQ71U36 451 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 NANOGNBQ7Z5D8 188 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 ST8SIA1Q92185 356 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 METTL7AQ9H8H3 244 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 PPP4R1LQ9P1A2 415 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 SEC14L4Q9UDX3 406 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 SLC6A5Q9Y345 797 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 NSG1A0A0A6YYJ2 146 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 TEX13CA0A0J9YWL9 993 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 OR6C68A6NDL8 312 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 LALBAP00709 142 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 MRPL3P09001 348 aaKnown RBP20.19■□□□□ 0.82
SMAD1-201ENST00000302085 SBK2P0C263 348 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 APEHP13798 732 aaKnown RBP20.19■□□□□ 0.82
SMAD1-201ENST00000302085 CASP3P42574 277 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 CDKN2AP42771 156 aaKnown RBP20.19■□□□□ 0.82
SMAD1-201ENST00000302085 C1orf140Q5VVS0 124 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 ZNF322Q6U7Q0 402 aaPredicted RBP20.19■□□□□ 0.82
SMAD1-201ENST00000302085 DHRS13Q6UX07 377 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 GHDCQ8N2G8 530 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 OR52N1Q8NH53 320 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 SPRYD4Q8WW59 207 aaPredicted RBP20.19■□□□□ 0.82
SMAD1-201ENST00000302085 ZNRF4Q8WWF5 429 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 SLC25A36Q96CQ1 311 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms