RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 OR5H14A6NHG9 310 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 PRAF2O60831 178 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 SNAPINO95295 136 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 CD9P21926 228 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 PNLIPRP1P54315 467 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 RING1Q06587 406 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 GXYLT1Q4G148 440 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 C12orf40Q86WS4 652 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 STX12Q86Y82 276 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 SLC44A3Q8N4M1 653 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 STEAP2Q8NFT2 490 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 OR6K3Q8NGY3 331 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 AKR1E2Q96JD6 320 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 JSRP1Q96MG2 331 aaPredicted RBP13.3□□□□□ -0.28
CDT1-201ENST00000301019 POFUT1Q9H488 388 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 KRCC1Q9NPI7 259 aaPredicted RBP13.3□□□□□ -0.28
CDT1-201ENST00000301019 SLC27A6Q9Y2P4 619 aa13.3□□□□□ -0.28
CDT1-201ENST00000301019 SMIM35A0A1B0GVV1 85 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 KDM4EB2RXH2 506 aaPredicted RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 TSPAN6O43657 245 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 CD3DP04234 171 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 GKN3PP0CG01 181 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 EDNRAP25101 427 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 GJA4P35212 333 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 CEBPGP53567 150 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 PGGHGQ32M88 737 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 ADCK2Q7Z695 626 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 IP6K3Q96PC2 410 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 INSM2Q96T92 566 aaPredicted RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 CPEB1Q9BZB8 566 aaKnown RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 UFSP2Q9NUQ7 469 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 DNAJB11Q9UBS4 358 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 DOCK4Q8N1I0 1966 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 GBF1Q92538 1859 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 A0A1W2PRQ8 180 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 WRBO00258 174 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 GATCO43716 136 aaKnown RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 CHRM4P08173 479 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 SAGP10523 405 aaPredicted RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 MUC1P15941 1255 aaPredicted RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 RBM34P42696 430 aaKnown RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 GGTA1PQ4G0N0 100 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 LIPJQ5W064 366 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 MACC1Q6ZN28 852 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 TPRA1Q86W33 373 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 SPICQ8N5J4 248 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 BBS4Q96RK4 519 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 RSPH9Q9H1X1 276 aaPredicted RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 PIGMQ9H3S5 423 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 DCAF16Q9NXF7 216 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 PRR13Q9NZ81 148 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 COMMD9Q9P000 198 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 USP36Q9P275 1121 aaKnown RBP13.29□□□□□ -0.28
CDT1-201ENST00000301019 SCML2Q9UQR0 700 aa13.29□□□□□ -0.28
CDT1-201ENST00000301019 C17orf102A2RUQ5 167 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 ZNF879B4DU55 563 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 ADAMTS4O75173 837 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 UBBP0CG47 229 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 UBCP0CG48 685 aaKnown RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 UQCRC2P22695 453 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 HTR1FP30939 366 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 TBPL1P62380 186 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 EFNB1P98172 346 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 CLEC9AQ6UXN8 241 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 OR2T33Q8NG76 320 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 OR4A4PQ8NGN8 299 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 PFN4Q8NHR9 129 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 PIGXQ8TBF5 258 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 PPP1R1CQ8WVI7 109 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 FGF11Q92914 225 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 COL26A1Q96A83 441 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 UBQLN3Q9H347 655 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 C5orf52A6NGY3 159 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 COLCA2A8K830 154 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 H7C0S8 307 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 SULT2B1O00204 365 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 SERPINA5P05154 406 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 IMPA1P29218 277 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 RPS27P42677 84 aaKnown RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 RIDAP52758 137 aaKnown RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 RAB2AP61019 212 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 ACTR1AP61163 376 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 CTXN3Q4LDR2 81 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 MOB3CQ70IA8 216 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 EIF4E3Q8N5X7 224 aaKnown RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 STOML3Q8TAV4 291 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 ST7LQ8TDW4 575 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 TRPV4Q9HBA0 871 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 MAFFQ9ULX9 164 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 RALGAPA2Q2PPJ7 1873 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 KPNA3O00505 521 aaPredicted RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 VEGFDO43915 354 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 DOK2O60496 412 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 BTF3P20290 206 aaKnown RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 VAMP1P23763 118 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 CD1CP29017 333 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 RGS8P57771 180 aaPredicted RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 SMIM11AP58511 58 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms