RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CDK2AP1O14519 115 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 CTSEP14091 401 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 GDI2P50395 445 aaKnown RBP11.83□□□□□ -0.52
HIF3A-204ENST00000300862 MAZP56270 477 aaKnown RBP11.83□□□□□ -0.52
HIF3A-204ENST00000300862 PER3P56645 1201 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 ERVK-25P63136 954 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 FCN2Q15485 313 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 SNX33Q8WV41 574 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 HSD17B8Q92506 261 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 PMM1Q92871 262 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 CREB3L1Q96BA8 519 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 GSDMCQ9BYG8 508 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 CYP8B1Q9UNU6 501 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 ERVK-19Q9WJR5 959 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 OR10H1Q9Y4A9 318 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 A0A1B0GVT2 93 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 LINC00862A6NCI5 91 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 SLC22A5O76082 557 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 SOX30O94993 753 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 CSTAP01040 98 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 AHCYP23526 432 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 BTCP35070 178 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 ATP12AP54707 1039 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 TAS2R43P59537 309 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 ULK3Q6PHR2 472 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 ZNF782Q6ZMW2 699 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-204ENST00000300862 PRSS45Q7RTY3 260 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 OMA1Q96E52 524 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 DNAJA3Q96EY1 480 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 SPOCK3Q9BQ16 436 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 LMF2Q9BU23 707 aaKnown RBP11.82□□□□□ -0.52
HIF3A-204ENST00000300862 ZFP64Q9NPA5 681 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 BRD7Q9NPI1 651 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 NUDT15Q9NV35 164 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 CD207Q9UJ71 328 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 FBXL21Q9UKT6 434 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 AUP1Q9Y679 476 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 A0A0A6YYJ9 748 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 OR6C68A6NDL8 312 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 FOXS1O43638 330 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 GMFGO60234 142 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 NDUFB2O95178 105 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 THEGLP0DJG4 465 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 CT45A8P0DMV1 189 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 CT45A9P0DMV2 189 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 RBMS1P29558 406 aaKnown RBP11.82□□□□□ -0.52
HIF3A-204ENST00000300862 DGCR2P98153 550 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 NTRK2Q16620 822 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 PLA1AQ53H76 456 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 CT45A2Q5DJT8 189 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 MANEAQ5SRI9 462 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 SLC35F2Q8IXU6 374 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 C16orf52Q8NHV5 167 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 KCTD12Q96CX2 325 aaKnown RBP11.82□□□□□ -0.52
HIF3A-204ENST00000300862 SGTBQ96EQ0 304 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 CNN2Q99439 309 aaKnown RBP11.82□□□□□ -0.52
HIF3A-204ENST00000300862 SEMA6CQ9H3T2 930 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 MKKSQ9NPJ1 570 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-204ENST00000300862 POLE3Q9NRF9 147 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-204ENST00000300862 HAO2Q9NYQ3 351 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 CACNG2Q9Y698 323 aa11.82□□□□□ -0.52
HIF3A-204ENST00000300862 TRBV2A0A0J9YWF9 115 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 IFNA16P05015 189 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 EDNRAP25101 427 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 ACTC1P68032 377 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 ACTA1P68133 377 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 SIRPAP78324 504 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 FZD2Q14332 565 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 CDK5R1Q15078 307 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 TEX261Q6UWH6 196 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 LINC00114Q6XXX2 140 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 TPRA1Q86W33 373 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 GRAMD2AQ8IUY3 354 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 ARHGEF39Q8N4T4 335 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 C19orf47Q8N9M1 422 aaKnown RBP11.81□□□□□ -0.52
HIF3A-204ENST00000300862 LRRC20Q8TCA0 184 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 RLN3Q8WXF3 142 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 HOXB13Q92826 284 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-204ENST00000300862 GCDHQ92947 438 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-204ENST00000300862 TSSK2Q96PF2 358 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 MAP3K3Q99759 626 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 SERTAD3Q9UJW9 196 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 POMT2Q9UKY4 750 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 BAIAP2Q9UQB8 552 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 U3KQ87 197 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 ARID1BQ8NFD5 2236 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-204ENST00000300862 KIR2DS5A0A0G2JLQ3 304 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 A0A0G2JNG1 304 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 KIR2DS3K7RE56 304 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 PDGFAP04085 211 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 SYPP08247 313 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 ADRB1P08588 477 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 DRD1P21728 446 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 RBM34P42696 430 aaKnown RBP11.81□□□□□ -0.52
HIF3A-204ENST00000300862 RABIFP47224 123 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 CCR4P51679 360 aa11.81□□□□□ -0.52
HIF3A-204ENST00000300862 GBX2P52951 348 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-204ENST00000300862 RPS11P62280 158 aaKnown RBP eCLIP11.81□□□□□ -0.52
HIF3A-204ENST00000300862 FGFBP1Q14512 234 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms