RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HSD17B7P56937 341 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 IL13RA1P78552 427 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 IL17RDQ8NFM7 739 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 OR4M1Q8NGD0 313 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 RLN3Q8WXF3 142 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 NICN1Q9BSH3 213 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 METTL9Q9H1A3 318 aa11.87□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF593O00488 134 aaPredicted RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 PLPP1O14494 284 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 MT-CO2P00403 227 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 RPS25P62851 125 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 MLF2Q15773 248 aaPredicted RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 CDKN3Q16667 212 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 SHISA6Q6ZSJ9 500 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 NDUFAF7Q7L592 441 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 SERPINA12Q8IW75 414 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 SULF2Q8IWU5 870 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ASB16Q96NS5 453 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 NAA50Q9GZZ1 169 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ACAD8Q9UKU7 415 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 UGT2A1Q9Y4X1 527 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 LRIT2A6NDA9 550 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 CPNE6O95741 557 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ALDOBP05062 364 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 MSX1P28360 303 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 PXNP49023 591 aaPredicted RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 FXYD4P59646 89 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 RACK1P63244 317 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 YIF1BQ5BJH7 314 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 OR7E24Q6IFN5 339 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 TBPL2Q6SJ96 375 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 FCRLAQ7L513 359 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 OR56B1Q8NGI3 324 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ABHD4Q8TB40 342 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 NPRL2Q8WTW4 380 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 HLA-CQ95604 372 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 RADILQ96JH8 1075 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 MAP3K3Q99759 626 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 LSM5Q9Y4Y9 91 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 FAM230AA0A1W2PPH8 454 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 CSO75390 466 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 UBL3O95164 117 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 MT-ATP6P00846 226 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 F13BP05160 661 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 AQP2P41181 271 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 MAT1AQ00266 395 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ADIPOR2Q86V24 386 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 BOLLQ8N9W6 283 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 OR52I1Q8NGK6 324 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 LRFN5Q96NI6 719 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ZDHHC5Q9C0B5 715 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ATG4BQ9Y4P1 393 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 B3GALT1Q9Y5Z6 326 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 TMED7-TICAM2A0A0A6YYA0 188 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 KDM4EB2RXH2 506 aaPredicted RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 EIF4E2O60573 245 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 CD27P26842 260 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 FKBP2P26885 142 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 POLR2IP36954 125 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 CX3CR1P49238 355 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 OR14K1Q8NGZ2 314 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 OR6F1Q8NGZ6 308 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 OR1S1Q8NH92 325 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 GCDHQ92947 438 aaPredicted RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF285Q96NJ3 590 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 SPHK1Q9NYA1 384 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 TMED7Q9Y3B3 224 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 A0A1B0GTW7 788 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 DVL2O14641 736 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 EIF1BO60739 113 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 MT-ND4P03905 459 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 THBS1P07996 1170 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 TNFSF4P23510 183 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 SSR4P51571 173 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 LIM2P55344 173 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 RBMS2Q15434 407 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 TATDN3Q17R31 274 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 PLCXD3Q63HM9 321 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 OR1J4Q8NGS1 313 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 SENP5Q96HI0 755 aaPredicted RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 TEX37Q96LM6 180 aa11.86□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF436Q9C0F3 470 aaPredicted RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 MYEF2Q9P2K5 600 aaKnown RBP11.86□□□□□ -0.51
PTCD1-201ENST00000292478 TRBV5-4A0A0C4DH59 114 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 OR2A25A4D2G3 310 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 CXCL10P02778 98 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 LPLP06858 475 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 CD46P15529 392 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 SPOCK1Q08629 439 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 DCAF12Q5T6F0 453 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF836Q6ZNA1 936 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 MED25Q71SY5 747 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 TRAPPC6BQ86SZ2 158 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 PDXPQ96GD0 296 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 NIPSNAP1Q9BPW8 284 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 PPT2Q9UMR5 302 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 LOC105369274A0A096LPK9 316 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 CD14P08571 375 aa11.85□□□□□ -0.51
PTCD1-201ENST00000292478 TUBG1P23258 451 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms