RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 POTEKPQ9BYX7 375 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 RABEP2Q9H5N1 569 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 ZNF385DQ9H6B1 395 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 ARMC7Q9H6L4 198 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 SLC52A3Q9NQ40 469 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 THUMPD1Q9NXG2 353 aaKnown RBP8.64□□□□□ -1.03
CCDC58-201ENST00000291458 SLC13A4Q9UKG4 626 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 GPR52Q9Y2T5 361 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 IFT52Q9Y366 437 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 NDUFAF1Q9Y375 327 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 OTOGQ6ZRI0 2925 aa8.64□□□□□ -1.03
CCDC58-201ENST00000291458 TEP1Q99973 2627 aaKnown RBP8.63□□□□□ -1.03
CCDC58-201ENST00000291458 TRBV5-3A0A0A0MS03 114 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 A0A1W2PP18 115 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 LIPT2A6NK58 231 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 ZNF724A8MTY0 619 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 M0R3H8 397 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 FAAHO00519 579 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 ZNF208O43345 1280 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 MRPL33O75394 65 aaKnown RBP8.63□□□□□ -1.03
CCDC58-201ENST00000291458 AHSA1O95433 338 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 GPIP06744 558 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 CD99P14209 185 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 GGT1P19440 569 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 HTR2AP28223 471 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 NTF4P34130 210 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 RPS5P46782 204 aaKnown RBP8.63□□□□□ -1.03
CCDC58-201ENST00000291458 BSPH1Q075Z2 132 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 LGALS3BPQ08380 585 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 SPOCK1Q08629 439 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 ITGADQ13349 1161 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 PPA1Q15181 289 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 ACKR1Q16570 336 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 HSP90B2PQ58FF3 399 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 C1orf140Q5VVS0 124 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 PRAMEF8Q5VWM4 474 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 PRAMEF7Q5VXH5 474 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 CGB2Q6NT52 195 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 Q6ZT83 130 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 KRT73Q86Y46 540 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 TGIF2LYQ8IUE0 185 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 VANGL1Q8TAA9 524 aaPredicted RBP8.63□□□□□ -1.03
CCDC58-201ENST00000291458 AKAP1Q92667 903 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC58-201ENST00000291458 ALKBH3Q96Q83 286 aaPredicted RBP8.63□□□□□ -1.03
CCDC58-201ENST00000291458 CGREF1Q99674 301 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 C1QTNF6Q9BXI9 259 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 ADAM19Q9H013 955 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 GP6Q9HCN6 339 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 UPB1Q9UBR1 384 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 SEC14L4Q9UDX3 406 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 CORO2BQ9UQ03 480 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 RNF115Q9Y4L5 304 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 FLVCR1Q9Y5Y0 555 aa8.63□□□□□ -1.03
CCDC58-201ENST00000291458 IGKV3D-15A0A087WSY6 115 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 A0A1B0GWA3 101 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 A8MVM7 634 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 M0R1B8 84 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 KRT33AO76009 404 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 CD3EP07766 207 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 ZNF83P51522 516 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 ARFIP2P53365 341 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 NR1H2P55055 460 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 ADAM8P78325 824 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 NKX6-1P78426 367 aaPredicted RBP8.62□□□□□ -1.03
CCDC58-201ENST00000291458 DMTNQ08495 405 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 P2RY6Q15077 328 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 MMEL1Q495T6 779 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 RUNDC3AQ59EK9 446 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 FBXW9Q5XUX1 488 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 REP15Q6BDI9 236 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 DLEU7Q6UYE1 221 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 Q71RC1 249 aaPredicted RBP8.62□□□□□ -1.03
CCDC58-201ENST00000291458 AAED1Q7RTV5 226 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 ARMC8Q8IUR7 673 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 KDM8Q8N371 416 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 C10orf53Q8N6V4 93 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 ZNF433Q8N7K0 673 aaPredicted RBP8.62□□□□□ -1.03
CCDC58-201ENST00000291458 HIPK4Q8NE63 616 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 OR9K2Q8NGE7 335 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 PMM1Q92871 262 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 KTI12Q96EK9 354 aaPredicted RBP8.62□□□□□ -1.03
CCDC58-201ENST00000291458 ZNF385AQ96PM9 386 aaKnown RBP8.62□□□□□ -1.03
CCDC58-201ENST00000291458 ZNF607Q96SK3 696 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 WFDC6Q9BQY6 131 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 SPATA5L1Q9BVQ7 753 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 RSPO3Q9BXY4 272 aaPredicted RBP8.62□□□□□ -1.03
CCDC58-201ENST00000291458 CXXC4Q9H2H0 198 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 BCL2L10Q9HD36 194 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 BEX4Q9NWD9 120 aaPredicted RBP8.62□□□□□ -1.03
CCDC58-201ENST00000291458 NPAP1Q9NZP6 1156 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 SELENONQ9NZV5 590 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 SLC9A8Q9Y2E8 581 aa8.62□□□□□ -1.03
CCDC58-201ENST00000291458 AQP7P3A6NL99 342 aa8.61□□□□□ -1.03
CCDC58-201ENST00000291458 CPSF4LA6NMK7 179 aaKnown RBP8.61□□□□□ -1.03
CCDC58-201ENST00000291458 FBP2O00757 339 aa8.61□□□□□ -1.03
CCDC58-201ENST00000291458 GPR171O14626 319 aa8.61□□□□□ -1.03
CCDC58-201ENST00000291458 HS3ST1O14792 307 aa8.61□□□□□ -1.03
CCDC58-201ENST00000291458 MRASO14807 208 aa8.61□□□□□ -1.03
CCDC58-201ENST00000291458 SMAD7O15105 426 aaKnown RBP8.61□□□□□ -1.03
CCDC58-201ENST00000291458 EIF1BO60739 113 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms