RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 FOXD3Q9UJU5 478 aaPredicted RBP23.97■■□□□ 1.43
SSU72-201ENST00000291386 CLEC4AQ9UMR7 237 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 IGKV3D-15A0A087WSY6 115 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 ZNF724A8MTY0 619 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 YES1P07947 543 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 SLC16A1P53985 500 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 TAS2R41P59536 307 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 SIRPAP78324 504 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 DNAL1Q4LDG9 190 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 FAM69AQ5T7M9 428 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 WDR88Q6ZMY6 472 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 TUSC5Q8IXB3 177 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 LRRC46Q96FV0 321 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 PRRC1Q96M27 445 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 NSMCE2Q96MF7 247 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 PRSS27Q9BQR3 290 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 SLC19A3Q9BZV2 496 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 RIMS3Q9UJD0 308 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 A4GNTQ9UNA3 340 aa23.96■■□□□ 1.43
SSU72-201ENST00000291386 ZNF716A6NP11 495 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 A8MXE2 369 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 ZNF814B7Z6K7 855 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 C19orf84I3L1E1 186 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 RPS5P46782 204 aaKnown RBP23.95■■□□□ 1.42
SSU72-201ENST00000291386 PCYT1AP49585 367 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 PIN1Q13526 163 aaPredicted RBP23.95■■□□□ 1.42
SSU72-201ENST00000291386 TRIM25Q14258 630 aaKnown RBP23.95■■□□□ 1.42
SSU72-201ENST00000291386 TMEM201Q5SNT2 666 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 SP5Q6BEB4 398 aaPredicted RBP23.95■■□□□ 1.42
SSU72-201ENST00000291386 RNASE6Q93091 150 aaKnown RBP23.95■■□□□ 1.42
SSU72-201ENST00000291386 TAAR8Q969N4 342 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 BTBD10Q9BSF8 475 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 NPDC1Q9NQX5 325 aaPredicted RBP23.95■■□□□ 1.42
SSU72-201ENST00000291386 PROCRQ9UNN8 238 aa23.95■■□□□ 1.42
SSU72-201ENST00000291386 UTP20O75691 2785 aaKnown RBP23.94■■□□□ 1.42
SSU72-201ENST00000291386 AQP7P3A6NL99 342 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 EEF1E1-BLOC1S5C9J1V9 151 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 GYG2O15488 501 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 EEF1E1O43324 174 aaKnown RBP23.94■■□□□ 1.42
SSU72-201ENST00000291386 IGFBP2P18065 325 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 IFNA8P32881 189 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 P2RY4P51582 365 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 MFSD13AQ14CX5 517 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 TTC33Q6PID6 262 aaPredicted RBP23.94■■□□□ 1.42
SSU72-201ENST00000291386 CCDC103Q8IW40 242 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 PYURFQ96I23 114 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 ENKD1Q9H0I2 346 aa23.94■■□□□ 1.42
SSU72-201ENST00000291386 ATP5HO75947 161 aa23.93■■□□□ 1.42
SSU72-201ENST00000291386 AKR7A3O95154 331 aa23.93■■□□□ 1.42
SSU72-201ENST00000291386 SEMG1P04279 462 aa23.93■■□□□ 1.42
SSU72-201ENST00000291386 RBM34P42696 430 aaKnown RBP23.93■■□□□ 1.42
SSU72-201ENST00000291386 ST3GAL3Q11203 375 aa23.93■■□□□ 1.42
SSU72-201ENST00000291386 MTX3Q5HYI7 312 aa23.93■■□□□ 1.42
SSU72-201ENST00000291386 OTUD3Q5T2D3 398 aaPredicted RBP23.93■■□□□ 1.42
SSU72-201ENST00000291386 TMEM99Q8N816 258 aa23.93■■□□□ 1.42
SSU72-201ENST00000291386 THTPAQ9BU02 230 aa23.93■■□□□ 1.42
SSU72-201ENST00000291386 SF3B5Q9BWJ5 86 aaKnown RBP23.93■■□□□ 1.42
SSU72-201ENST00000291386 EMC3Q9P0I2 261 aa23.93■■□□□ 1.42
SSU72-201ENST00000291386 GPR171O14626 319 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 RAMP1O60894 148 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 VAMP5O95183 116 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 IGF2P01344 180 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 BGLAPP02818 100 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 SLC17A1Q14916 467 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 LCN8Q6JVE9 175 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 TSEN54Q7Z6J9 526 aaKnown RBP23.92■■□□□ 1.42
SSU72-201ENST00000291386 P3H2Q8IVL5 708 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 OFCC1Q8IZS5 231 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 FAM86B1Q8N7N1 296 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 ASB9Q96DX5 294 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 C7orf34Q96L11 122 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 ZNF300Q96RE9 604 aaPredicted RBP23.92■■□□□ 1.42
SSU72-201ENST00000291386 ENPP4Q9Y6X5 453 aa23.92■■□□□ 1.42
SSU72-201ENST00000291386 FFAR1O14842 300 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 SMNDC1O75940 238 aaKnown RBP eCLIP23.91■■□□□ 1.42
SSU72-201ENST00000291386 PDE5AO76074 875 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 PEX19P40855 299 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 RASSF2P50749 326 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 LTBQ06643 244 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 PGM2L1Q6PCE3 622 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 NUFIP2Q7Z417 695 aaKnown RBP23.91■■□□□ 1.42
SSU72-201ENST00000291386 LUZP2Q86TE4 346 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 NKAIN4Q8IVV8 208 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 ADPRHL1Q8NDY3 354 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 SLC25A36Q96CQ1 311 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 HS6ST2Q96MM7 605 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 SPOCK3Q9BQ16 436 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 RBM24Q9BX46 236 aaKnown RBP23.91■■□□□ 1.42
SSU72-201ENST00000291386 OPN3Q9H1Y3 402 aaPredicted RBP23.91■■□□□ 1.42
SSU72-201ENST00000291386 CORINQ9Y5Q5 1042 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 HECTD1Q9ULT8 2610 aa23.91■■□□□ 1.42
SSU72-201ENST00000291386 PRSS23O95084 383 aa23.9■■□□□ 1.42
SSU72-201ENST00000291386 MT-ATP6P00846 226 aa23.9■■□□□ 1.42
SSU72-201ENST00000291386 GTF2E2P29084 291 aaKnown RBP23.9■■□□□ 1.42
SSU72-201ENST00000291386 MS4A2Q01362 244 aa23.9■■□□□ 1.42
SSU72-201ENST00000291386 ZNF474Q6S9Z5 364 aaPredicted RBP23.9■■□□□ 1.42
SSU72-201ENST00000291386 GALNT5Q7Z7M9 940 aa23.9■■□□□ 1.42
SSU72-201ENST00000291386 DHFR2Q86XF0 187 aa23.9■■□□□ 1.42
SSU72-201ENST00000291386 ZNF610Q8N9Z0 462 aa23.9■■□□□ 1.42
SSU72-201ENST00000291386 POP5Q969H6 163 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms