RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 GABRR1P24046 479 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 AGTR1P30556 359 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 PPP5CP53041 499 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 HTRA4P83105 476 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-201ENST00000287008 FAM69AQ5T7M9 428 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 PXKQ7Z7A4 578 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 MYEOVQ96EZ4 313 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 VRK1Q99986 396 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-201ENST00000287008 PCED1AQ9H1Q7 454 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 TMEM38AQ9H6F2 299 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 N4BP2Q86UW6 1770 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-201ENST00000287008 TMEM72A0PK05 275 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 H7C1C5 153 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 ZNF593O00488 134 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-201ENST00000287008 IFNA2P01563 188 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 DRD5P21918 477 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 LCN6P62502 163 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 GRINAQ7Z429 371 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 ZBTB8BQ8NAP8 495 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-201ENST00000287008 OR4K15Q8NH41 348 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 SLC19A3Q9BZV2 496 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 POLE4Q9NR33 117 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 ZNF736B4DX44 427 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-201ENST00000287008 CEACAM5P06731 702 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 CD22P20273 847 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 IL2RGP31785 369 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 FGL1Q08830 312 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 KIAA1211LQ6NV74 962 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 IL1F10Q8WWZ1 152 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 FAM166BA8MTA8 275 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 DVL2O14641 736 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 FOXD2O60548 495 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-201ENST00000287008 CBX7O95931 251 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 CDK2P24941 298 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 KMT5CQ86Y97 462 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 SGPP2Q8IWX5 399 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 OR52A5Q9H2C5 316 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 C19orf53Q9UNZ5 99 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-201ENST00000287008 MAB21L2Q9Y586 359 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 AHCTF1Q8WYP5 2266 aa17.15■□□□□ 0.34
PCDH1-201ENST00000287008 COL18A1P39060 1754 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 SPTY2D1-AS1A0A0U1RR47 76 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 CAPNS1P04632 268 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 MRPS10P82664 201 aaKnown RBP17.14■□□□□ 0.33
PCDH1-201ENST00000287008 TRMT12Q53H54 448 aaKnown RBP17.14■□□□□ 0.33
PCDH1-201ENST00000287008 COX20Q5RI15 118 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 CFAP77Q6ZQR2 320 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 ASCC1Q8N9N2 400 aaKnown RBP17.14■□□□□ 0.33
PCDH1-201ENST00000287008 OR6T1Q8NGN1 323 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 ADAMTS14Q8WXS8 1223 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 NIPAL2Q9H841 368 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 SLC23A2Q9UGH3 650 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 DUSP13Q9UII6 198 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 NUP205Q92621 2012 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 KRBA1A5PL33 1030 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 TRIM64BA6NI03 449 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF814B7Z6K7 855 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 PRRG2O14669 202 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 TSPAN9O75954 239 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 CD34P28906 385 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 GABRA2P47869 451 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 C1orf53Q5VUE5 145 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 RPL22L1Q6P5R6 122 aaKnown RBP17.14■□□□□ 0.33
PCDH1-201ENST00000287008 STEAP2Q8NFT2 490 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 TP53TG5Q9Y2B4 290 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 SCN7AQ01118 1682 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 GASTP01350 101 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 C21orf33P30042 268 aaPredicted RBP17.14■□□□□ 0.33
PCDH1-201ENST00000287008 EPHA5P54756 1037 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 P2RY14Q15391 338 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 CCDC58Q4VC31 144 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 CYP4V2Q6ZWL3 525 aaPredicted RBP17.14■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF454Q8N9F8 522 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 GOT1L1Q8NHS2 421 aaPredicted RBP17.14■□□□□ 0.33
PCDH1-201ENST00000287008 ARL6Q9H0F7 186 aa17.14■□□□□ 0.33
PCDH1-201ENST00000287008 WSB2Q9NYS7 404 aaPredicted RBP17.14■□□□□ 0.33
PCDH1-201ENST00000287008 MKRN2OSH3BPM6 223 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 SURF4O15260 269 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 TIMM8AO60220 97 aaPredicted RBP17.13■□□□□ 0.33
PCDH1-201ENST00000287008 TNFSF15O95150 251 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 FKBP2P26885 142 aaKnown RBP17.13■□□□□ 0.33
PCDH1-201ENST00000287008 DPY19L4Q7Z388 723 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 ETFBKMTQ8IXQ9 262 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 PSMF1Q92530 271 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 OR51E2Q9H255 320 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 OR14J1Q9UGF5 321 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 USP22Q9UPT9 525 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 KLF13Q9Y2Y9 288 aaPredicted RBP17.13■□□□□ 0.33
PCDH1-201ENST00000287008 GMEB1Q9Y692 573 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 A0A1W2PR48 441 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 H0YIG0 161 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 OR7C1O76099 320 aaPredicted RBP17.13■□□□□ 0.33
PCDH1-201ENST00000287008 DUSP5Q16690 384 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 CNOT9Q92600 299 aaKnown RBP17.13■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF285Q96NJ3 590 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 NICN1Q9BSH3 213 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 ASIC5Q9NY37 505 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 B3GALT1Q9Y5Z6 326 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 C2orf72A6NCS6 295 aa17.13■□□□□ 0.33
PCDH1-201ENST00000287008 A8MV72 311 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms