RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GSTK1Q9Y2Q3 226 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF337Q9Y3M9 751 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 SHISA3A0PJX4 238 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 SELENOFO60613 162 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 RPS27P42677 84 aaKnown RBP16.35■□□□□ 0.21
CAPN1-201ENST00000279247 EMP2P54851 167 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 BIKQ13323 160 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 C11orf91Q3C1V1 193 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 DTWD2Q8NBA8 298 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 OR13C5Q8NGS8 318 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 CRB3Q9BUF7 120 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 SEMA5BQ9P283 1151 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 GABRPO00591 440 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 DCDP81605 110 aaKnown RBP16.35■□□□□ 0.21
CAPN1-201ENST00000279247 TBC1D25Q3MII6 688 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF440Q8IYI8 595 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF511Q8NB15 262 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 GFM1Q96RP9 751 aaKnown RBP16.35■□□□□ 0.21
CAPN1-201ENST00000279247 OR11A1Q9GZK7 315 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 FAIMQ9NVQ4 179 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 BABAM2Q9NXR7 383 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 TRBV11-1A0A0K0K1C0 115 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 TTC36A6NLP5 189 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 GDPGP1Q6ZNW5 385 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 SLITRK4Q8IW52 837 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 DTX3Q8N9I9 347 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 C17orf47Q8NEP4 570 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 OR4D9Q8NGE8 314 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 OR5J2Q8NH18 312 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 CEP76Q8TAP6 659 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 TAAR8Q969N4 342 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 TIMP4Q99727 224 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 ICAM5Q9UMF0 924 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 VDAC3Q9Y277 283 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 R4GN57 208 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 A0A1W2PRG6 482 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 ALOX12BO75342 701 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 PPM1BO75688 479 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 TFP02787 698 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF74Q16587 644 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 ALG10Q5BKT4 473 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 VASNQ6EMK4 673 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 RALGAPA1Q6GYQ0 2036 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 NANOGNBQ7Z5D8 188 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 ANKRD37Q7Z713 158 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 FAM71CQ8NEG0 241 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 LPAR4Q99677 370 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 NPAS1Q99742 590 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 SLC30A2Q9BRI3 323 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 NXF2Q9GZY0 626 aaKnown RBP16.34■□□□□ 0.21
CAPN1-201ENST00000279247 MMP25Q9NPA2 562 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 TIGARQ9NQ88 270 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 B3GNT3Q9Y2A9 372 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 PCDHGB6Q9Y5F9 930 aa16.34■□□□□ 0.21
CAPN1-201ENST00000279247 H3BSH0 61 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 TSPAN2O60636 221 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 SLC25A12O75746 678 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 UPK1BO75841 260 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 DLGAP3O95886 979 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 CCL4P13236 92 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF28P17035 718 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 EVI2BP34910 448 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 KDM8Q8N371 416 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 LSM14AQ8ND56 463 aaKnown RBP16.33■□□□□ 0.21
CAPN1-201ENST00000279247 OR5W2Q8NH69 310 aa16.33■□□□□ 0.21
CAPN1-201ENST00000279247 CRNNQ9UBG3 495 aaPredicted RBP16.33■□□□□ 0.21
CAPN1-201ENST00000279247 SHISA8B8ZZ34 492 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 BOLA2-SMG1P6H3BVE0 249 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 OPN1LWP04000 364 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 PNMTP11086 282 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 PSMB10P40306 273 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 CDKN2AP42771 156 aaKnown RBP16.33■□□□□ 0.2
CAPN1-201ENST00000279247 ZNF85Q03923 595 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 PON3Q15166 354 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 LYSMD2Q8IV50 215 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 APCDD1LQ8NCL9 501 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 OR52N1Q8NH53 320 aa16.33■□□□□ 0.2
CAPN1-201ENST00000279247 CPNE3O75131 537 aaKnown RBP16.32■□□□□ 0.2
CAPN1-201ENST00000279247 GPANK1O95872 356 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 HIST1H2ABP04908 130 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 SLC2A5P22732 501 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 RPL18Q07020 188 aaKnown RBP16.32■□□□□ 0.2
CAPN1-201ENST00000279247 GALEQ14376 348 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 ZSWIM7Q19AV6 140 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 HIST3H2AQ7L7L0 130 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 RABEPKQ7Z6M1 372 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 JAZF1Q86VZ6 243 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 HIST1H2ACQ93077 130 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 SLC25A46Q96AG3 418 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 TRIM36Q9NQ86 728 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 GNG8Q9UK08 70 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 NPFFR2Q9Y5X5 522 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 CCDC163A0A0D9SF12 145 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 J3QRE1 110 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 RNF13O43567 381 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 HLA-DPB1P04440 258 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 NRG3P56975 720 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 QPRTQ15274 297 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 TAB1Q15750 504 aa16.32■□□□□ 0.2
CAPN1-201ENST00000279247 DPY19L2P2Q6ZN68 376 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms