RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TFPIP10646 304 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 TPRP12270 2363 aaKnown RBP11.85□□□□□ -0.51
C9orf3-201ENST00000277198 STOMP27105 288 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 PYCR1P32322 319 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 BTCP35070 178 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 GBX2P52951 348 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-201ENST00000277198 OR10A3P58181 314 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ARF3P61204 181 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-201ENST00000277198 LGALS3BPQ08380 585 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 SHBQ15464 509 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ISXQ2M1V0 245 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 BTBD16Q32M84 506 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 SLC36A2Q495M3 483 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 SLC22A10Q63ZE4 541 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 LAMTOR1Q6IAA8 161 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 RPL22L1Q6P5R6 122 aaKnown RBP11.85□□□□□ -0.51
C9orf3-201ENST00000277198 FIGNL1Q6PIW4 674 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ASB18Q6ZVZ8 466 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 CMIPQ8IY22 773 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 TOMM5Q8N4H5 51 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 OR51A7Q8NH64 312 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 C17orf50Q8WW18 174 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 GFM1Q96RP9 751 aaKnown RBP11.85□□□□□ -0.51
C9orf3-201ENST00000277198 FBXO34Q9NWN3 711 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 EMC3Q9P0I2 261 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 CAMK2AQ9UQM7 478 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 AKAP13Q12802 2813 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 TRAV27A0A087WT01 109 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 LOC105369274A0A096LPK9 316 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 GXYLT2A0PJZ3 443 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 FLRT2O43155 660 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 GPRIN2O60269 458 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 LDB3O75112 727 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 DNAJB6O75190 326 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 NDUFB2O95178 105 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 PPP1R3DO95685 299 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 UCHL1P09936 223 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 EPXP11678 715 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 CD38P28907 300 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 EVI2BP34910 448 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 HTR2BP41595 481 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 PLAURQ03405 335 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 HSF2Q03933 536 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 IKZF1Q13422 519 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 DYRK1AQ13627 763 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 CDK5R1Q15078 307 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ZNHIT3Q15649 155 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-201ENST00000277198 CDONQ4KMG0 1287 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 SLC35D3Q5M8T2 416 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ULK3Q6PHR2 472 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 SLITRK4Q8IW52 837 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 OR4N4Q8N0Y3 316 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ANGPTL6Q8NI99 470 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ADAMTS14Q8WXS8 1223 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 THAP4Q8WY91 577 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 TNFRSF13CQ96RJ3 184 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 MCCC2Q9HCC0 563 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 KLHL1Q9NR64 748 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-201ENST00000277198 POT1Q9NUX5 634 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 CHRNA9Q9UGM1 479 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 TEKT2Q9UIF3 430 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 SPATA2Q9UM82 520 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 ICAM5Q9UMF0 924 aa11.85□□□□□ -0.51
C9orf3-201ENST00000277198 OR6C74A6NCV1 312 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 LRRN3E7EW58 273 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 SCAMP1O15126 338 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 TCRBP04435 133 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 MRPL3P09001 348 aaKnown RBP11.84□□□□□ -0.51
C9orf3-201ENST00000277198 TYRP1P17643 537 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 POLR2CP19387 275 aaPredicted RBP11.84□□□□□ -0.51
C9orf3-201ENST00000277198 SPINK2P20155 84 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 ACAA2P42765 397 aaKnown RBP11.84□□□□□ -0.51
C9orf3-201ENST00000277198 PSMD4P55036 377 aaKnown RBP11.84□□□□□ -0.51
C9orf3-201ENST00000277198 RAB38P57729 211 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 YPEL5P62699 121 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 SIRPAP78324 504 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 ID2Q02363 134 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 FHL1Q13642 323 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 ALG10BQ5I7T1 473 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 FAM27D1Q5T7N8 215 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 CA13Q8N1Q1 262 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 OR5J2Q8NH18 312 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 CNOT9Q92600 299 aaKnown RBP11.84□□□□□ -0.51
C9orf3-201ENST00000277198 SNAPC3Q92966 411 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 YIPF5Q969M3 257 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 CNN2Q99439 309 aaKnown RBP11.84□□□□□ -0.51
C9orf3-201ENST00000277198 MRI1Q9BV20 369 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 LRRN3Q9H3W5 708 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
C9orf3-201ENST00000277198 FLRT3Q9NZU0 649 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 AKAP7Q9P0M2 348 aaPredicted RBP11.84□□□□□ -0.51
C9orf3-201ENST00000277198 HSPB11Q9Y547 144 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 FREM2Q5SZK8 3169 aa11.84□□□□□ -0.51
C9orf3-201ENST00000277198 PPM1BO75688 479 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CBX7O95931 251 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ADRB1P08588 477 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ANXA3P12429 323 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 PTNP21246 168 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 HNRNPA2B1P22626 353 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms