RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CD40LGP29965 261 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 UQCRC1P31930 480 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 CDKN2AP42771 156 aaKnown RBP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 DIO1P49895 249 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 FBXW4P57775 412 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 RAB15P59190 212 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 CTXN1P60606 82 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF85Q03923 595 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 LGALS3BPQ08380 585 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 PON3Q15166 354 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 QPRTQ15274 297 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 TBC1D25Q3MII6 688 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ALG10Q5BKT4 473 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 FAM199XQ6PEV8 388 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 HIST3H2AQ7L7L0 130 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ADGRG3Q86Y34 549 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ATP6V1C2Q8NEY4 427 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 HIST1H2ACQ93077 130 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 HGDQ93099 445 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 RASD2Q96D21 266 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 TMCO6Q96DC7 493 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ZMYND19Q96E35 227 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 Q96M85 177 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 KCTD7Q96MP8 289 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 NMNAT3Q96T66 252 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 COQ7Q99807 217 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 MED18Q9BUE0 208 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ARRDC1-AS1Q9H2J1 176 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 RERGLQ9H628 205 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 WDR54Q9H977 334 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 FKRPQ9H9S5 495 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 KLHL1Q9NR64 748 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 CRNNQ9UBG3 495 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF229Q9UJW7 825 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 TMED7Q9Y3B3 224 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 PCDHGB6Q9Y5F9 930 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 WISP1O95388 367 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 TXNDC12O95881 172 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 MT-ND5P03915 603 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 HLA-DPB1P04440 258 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 GP1BAP07359 652 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 CLEC2LP0C7M8 214 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 GAAP10253 952 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 ACP1P24666 158 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 MPLP40238 635 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 RPS5P46782 204 aaKnown RBP8.71□□□□□ -1.02
TRIM55-201ENST00000276573 POLR2HP52434 150 aaKnown RBP8.71□□□□□ -1.02
TRIM55-201ENST00000276573 IFITM3Q01628 133 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF45Q02386 682 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 C17orf67Q0P5P2 114 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 IL10RAQ13651 578 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 GGTLC2Q14390 218 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 SLC35D3Q5M8T2 416 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 C1QL3Q5VWW1 255 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 VASNQ6EMK4 673 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 POMZP3Q6PJE2 187 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 FAM122BQ7Z309 247 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 ARIH2OSQ8N7S6 290 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 RHBDD1Q8TEB9 315 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 SMAP2Q8WU79 429 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-201ENST00000276573 CHPT1Q8WUD6 406 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 RNF138Q8WVD3 245 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 ZNRF4Q8WWF5 429 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 TTC9Q92623 222 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 TAS2R10Q9NYW0 307 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 GPN3Q9UHW5 284 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-201ENST00000276573 PCDHGB2Q9Y5G2 931 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 NOX1Q9Y5S8 564 aa8.71□□□□□ -1.02
TRIM55-201ENST00000276573 SIRT4Q9Y6E7 314 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-201ENST00000276573 hCG_2014768A0A024R1R8 64 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 A0A1W2PQL4 384 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TMEM72A0PK05 275 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 C2orf72A6NCS6 295 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 J3QLW9 94 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 RNF13O43567 381 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SUSD5O60279 629 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 NPIPB7O75200 414 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 OR2T7P0C7T2 308 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF19P17023 458 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SPI1P17947 270 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 GALP22466 123 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 CALRP27797 417 aaKnown RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SDHAP31040 664 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 SDC2P34741 201 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 HCCSP53701 268 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ACTC1P68032 377 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 ACTA1P68133 377 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 MXD1Q05195 221 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 RPL18Q07020 188 aaKnown RBP8.7□□□□□ -1.02
TRIM55-201ENST00000276573 RGS21Q2M5E4 152 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 COL28A1Q2UY09 1125 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 LCN1P1Q5VSP4 162 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 TCEAL6Q6IPX3 200 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 LEG1Q6P5S2 330 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 LYPD8Q6UX82 237 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 DCDC5Q6ZRR9 648 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 GRINAQ7Z429 371 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 POMGNT2Q8NAT1 580 aa8.7□□□□□ -1.02
TRIM55-201ENST00000276573 OR51L1Q8NGJ5 315 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms