RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
TRIM23-202ENST00000274327 ANGPTL4Q9BY76 406 aa13.18□□□□□ -0.3
TRIM23-202ENST00000274327 ASCL3Q9NQ33 180 aa13.18□□□□□ -0.3
TRIM23-202ENST00000274327 HINT3Q9NQE9 182 aaKnown RBP13.18□□□□□ -0.3
TRIM23-202ENST00000274327 CHRNA9Q9UGM1 479 aa13.18□□□□□ -0.3
TRIM23-202ENST00000274327 IL17BQ9UHF5 180 aa13.18□□□□□ -0.3
TRIM23-202ENST00000274327 ERGIC3Q9Y282 383 aa13.18□□□□□ -0.3
TRIM23-202ENST00000274327 TRAV36DV7A0A075B6V5 113 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 RBMS1P29558 406 aaKnown RBP13.17□□□□□ -0.3
TRIM23-202ENST00000274327 ST13P50502 369 aaKnown RBP13.17□□□□□ -0.3
TRIM23-202ENST00000274327 PRPS1P60891 318 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 ZNF846Q147U1 533 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 ANKDD1AQ495B1 522 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 ZNF362Q5T0B9 420 aaPredicted RBP13.17□□□□□ -0.3
TRIM23-202ENST00000274327 SYT6Q5T7P8 510 aaPredicted RBP13.17□□□□□ -0.3
TRIM23-202ENST00000274327 NXNL2Q5VZ03 156 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 ARSKQ6UWY0 536 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 TMPRSS7Q7RTY8 843 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 LRRC75AQ8NAA5 344 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 C9orf43Q8TAL5 461 aaPredicted RBP13.17□□□□□ -0.3
TRIM23-202ENST00000274327 PSMF1Q92530 271 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 RORBQ92753 470 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 NPAS1Q99742 590 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 PTDSS2Q9BVG9 487 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 FKRPQ9H9S5 495 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 PROK2Q9HC23 129 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 HMG20AQ9NP66 347 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 NANSQ9NR45 359 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 ZNF229Q9UJW7 825 aa13.17□□□□□ -0.3
TRIM23-202ENST00000274327 ZC3H12DA2A288 527 aaKnown RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 A8MVM7 634 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 MCIDASD6RGH6 385 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 PEPDP12955 493 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 APOBEC1P41238 236 aaKnown RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 NOVA1P51513 510 aaKnown RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 BMXP51813 675 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 PLPPR5Q32ZL2 321 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 ZNF468Q5VIY5 522 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 RNLSQ5VYX0 342 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 B3GNTL1Q67FW5 361 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 JMJD6Q6NYC1 403 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 ARHGAP11AQ6P4F7 1023 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 POMZP3Q6PJE2 187 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 C5orf46Q6UWT4 87 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 DPY19L2P2Q6ZN68 376 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 ANKRD13BQ86YJ7 626 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 TMEM156Q8N614 296 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 FCGR1BQ92637 280 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 TMEM80Q96HE8 168 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 IP6K3Q96PC2 410 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 TAPBPLQ9BX59 468 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 HPF1Q9NWY4 346 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 SLC25A12O75746 678 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 CCL3P10147 92 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 HK1P19367 917 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 UQCRC1P31930 480 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 RPS5P46782 204 aaKnown RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 BCAP31P51572 246 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 PSMD7P51665 324 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 FOXF1Q12946 379 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 INPP5JQ15735 1006 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 SLC35F1Q5T1Q4 408 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 PRAMEF20Q5VT98 475 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 C1QL3Q5VWW1 255 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 CCDC81Q6ZN84 652 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 CXXC5Q7LFL8 322 aaKnown RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 CPOQ8IVL8 374 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 IL22RA1Q8N6P7 574 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 SIRT6Q8N6T7 355 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 C10orf53Q8N6V4 93 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 OR6S1Q8NH40 331 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 MOSPD2Q8NHP6 518 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 POC1BQ8TC44 478 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 MRGPRX4Q96LA9 322 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 SGCZQ96LD1 299 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 FGF20Q9NP95 211 aaPredicted RBP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 NRIP3Q9NQ35 241 aa13.16□□□□□ -0.3
TRIM23-202ENST00000274327 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM23-202ENST00000274327 ZNF292O60281 2723 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 CLDN25C9JDP6 229 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 ARPC3O15145 178 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 SLC22A1O15245 554 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 MT-ATP6P00846 226 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 LCKP06239 509 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 HTR1FP30939 366 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 CDH11P55287 796 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 GXYLT1Q4G148 440 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 ACER2Q5QJU3 275 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 C1orf140Q5VVS0 124 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 SLC22A10Q63ZE4 541 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 GID4Q8IVV7 300 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 GPALPP1Q8IXQ4 340 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 CENPSQ8N2Z9 138 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 BBS1Q8NFJ9 593 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 OR52I1Q8NGK6 324 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 RFKQ969G6 155 aa13.15□□□□□ -0.3
TRIM23-202ENST00000274327 LGALS12Q96DT0 336 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms