RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 RDH8Q9NYR8 311 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 EPHA6Q9UF33 1036 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 ITGB1BP2Q9UKP3 347 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 SATB2Q9UPW6 733 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 DHDHQ9UQ10 334 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 ALG5Q9Y673 324 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 MDC1Q14676 2089 aaKnown RBP13.46□□□□□ -0.26
CNOT9-201ENST00000273064 SYT5O00445 386 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 PLRG1O43660 514 aaKnown RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 SBK2P0C263 348 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ZNF24P17028 368 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ELK1P19419 428 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 CD1CP29017 333 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 HTR1FP30939 366 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 OR3A3P47888 321 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 OR3A2P47893 321 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 MRPL19P49406 292 aaKnown RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 SNU13P55769 128 aaKnown RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 RAB38P57729 211 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 PSPHP78330 225 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 TLE3Q04726 772 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 GLYR1Q49A26 553 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 PRAMEF8Q5VWM4 474 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 PRAMEF7Q5VXH5 474 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 SFXN4Q6P4A7 337 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 CAMKMTQ7Z624 323 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 RNASE11Q8TAA1 199 aaKnown RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 GRPEL2Q8TAA5 225 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 TMEM106AQ96A25 262 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ELSPBP1Q96BH3 223 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 CRISPLD2Q9H0B8 497 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ZNF304Q9HCX3 659 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 HEATR5BQ9P2D3 2071 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 GALR3O60755 368 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 TRIM3O75382 744 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 EEF1A1P5Q5VTE0 462 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 RAET1LQ5VY80 246 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 KIRREL2Q6UWL6 708 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 KANSL1Q7Z3B3 1105 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 COQ8AQ8NI60 647 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 SNAPC3Q92966 411 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 COX14Q96I36 57 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 OR2A14Q96R47 310 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 RBM7Q9Y580 266 aaKnown RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 DOCK9Q9BZ29 2069 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ACACAQ13085 2346 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 IDSB3KWA1 339 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ZNF264O43296 627 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 SLC2A1P11166 492 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ACTA2P62736 377 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ACTG2P63267 376 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 SIRPAP78324 504 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 POU3F1Q03052 451 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 C8orf44Q96CB5 159 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 TSPAN10Q9H1Z9 355 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 CDCP1Q9H5V8 836 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 FBXO8Q9NRD0 319 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 GSKIPQ9P0R6 139 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-201ENST00000273064 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 DOCK4Q8N1I0 1966 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 ANKRD36A6QL64 1941 aa13.45□□□□□ -0.26
CNOT9-201ENST00000273064 IGKV1-8A0A0C4DH67 115 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 LILRB5O75023 590 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 UCHL1P09936 223 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 HLA-DMAP28067 261 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 UGT2B10P36537 528 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 PCGF3Q3KNV8 242 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 KCTD18Q6PI47 426 aaPredicted RBP13.44□□□□□ -0.26
CNOT9-201ENST00000273064 NOXA1Q86UR1 476 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 RBM12BQ8IXT5 1001 aaKnown RBP13.44□□□□□ -0.26
CNOT9-201ENST00000273064 MFSD4AQ8N468 514 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 FTMTQ8N4E7 242 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 OR4C15Q8NGM1 316 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 SETD6Q8TBK2 473 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 CCDC86Q9H6F5 360 aaKnown RBP13.44□□□□□ -0.26
CNOT9-201ENST00000273064 ELOVL3Q9HB03 270 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 TRPV4Q9HBA0 871 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 QPCTLQ9NXS2 382 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 VSX1Q9NZR4 365 aaPredicted RBP13.44□□□□□ -0.26
CNOT9-201ENST00000273064 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 SLC35E2P0CK97 266 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 ANXA3P12429 323 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 PSMA3P25788 255 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 MAMDC2Q7Z304 686 aaPredicted RBP13.44□□□□□ -0.26
CNOT9-201ENST00000273064 OR5J2Q8NH18 312 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 SYNPRQ8TBG9 265 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 OR5B2Q96R09 309 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 NXF5Q9H1B4 397 aaKnown RBP13.44□□□□□ -0.26
CNOT9-201ENST00000273064 CACNA1DQ01668 2161 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 K7EQS6 105 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 GPANK1O95872 356 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 ART1P52961 327 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 YPEL5P62699 121 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 OCLNQ16625 522 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 BAHD1Q8TBE0 780 aaPredicted RBP13.44□□□□□ -0.26
CNOT9-201ENST00000273064 GPR119Q8TDV5 335 aa13.44□□□□□ -0.26
CNOT9-201ENST00000273064 SLC25A46Q96AG3 418 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms