RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TBC1D29Q9UFV1 150 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 KCNMB2Q9Y691 235 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 PLSCR5A0PG75 271 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 SIX6O95475 246 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 PTH2RP49190 550 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 MNX1P50219 401 aaPredicted RBP25.24■■□□□ 1.63
CBX4-201ENST00000269397 NANOS3P60323 173 aaKnown RBP25.24■■□□□ 1.63
CBX4-201ENST00000269397 VITQ6UXI7 678 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 GLDNQ6ZMI3 551 aaPredicted RBP25.24■■□□□ 1.63
CBX4-201ENST00000269397 USP53Q70EK8 1073 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 GRAMD2AQ8IUY3 354 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 COQ8AQ8NI60 647 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 TRPV4Q9HBA0 871 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 CHRNA9Q9UGM1 479 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 DPP7Q9UHL4 492 aa25.24■■□□□ 1.63
CBX4-201ENST00000269397 ZNF879B4DU55 563 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 TRIM77I1YAP6 450 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 B3GALT2O43825 422 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 PRAF2O60831 178 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 TUSC1Q2TAM9 212 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 TMEM69Q5SWH9 247 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 RD3Q7Z3Z2 195 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 HSPA12BQ96MM6 686 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 MS4A7Q9GZW8 240 aaPredicted RBP25.23■■□□□ 1.63
CBX4-201ENST00000269397 PTPRSQ13332 1948 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 C4orf47A7E2U8 309 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 FCER2P06734 321 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 RPL4P36578 427 aaKnown RBP25.23■■□□□ 1.63
CBX4-201ENST00000269397 RPS15AP62244 130 aaKnown RBP25.23■■□□□ 1.63
CBX4-201ENST00000269397 STX4Q12846 297 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 TMEM81Q6P7N7 255 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 SYS1Q8N2H4 156 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 REG4Q9BYZ8 158 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 C12orf4Q9NQ89 552 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 CACNA1CQ13936 2221 aa25.23■■□□□ 1.63
CBX4-201ENST00000269397 PRR32B1ATL7 298 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 GPR89AB7ZAQ6 455 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 AIPO00170 330 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 RPP14O95059 124 aaKnown RBP25.22■■□□□ 1.63
CBX4-201ENST00000269397 GPR89BP0CG08 455 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 TMIGD3P0DMS9 266 aaPredicted RBP25.22■■□□□ 1.63
CBX4-201ENST00000269397 SGCGQ13326 291 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 ZNF613Q6PF04 617 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 FAM198BQ6UWH4 519 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 CDRT4Q8N9R6 151 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 KLHL15Q96M94 604 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 OR1F2PQ96R84 312 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 FGF22Q9HCT0 170 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 TAS2R10Q9NYW0 307 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 ALPK2Q86TB3 2170 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 LGALS8O00214 317 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 TYRP1P17643 537 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 NFYAP23511 347 aaPredicted RBP25.22■■□□□ 1.63
CBX4-201ENST00000269397 P2RX1P51575 399 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 PON3Q15166 354 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 HDDC2Q7Z4H3 204 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 FAM71CQ8NEG0 241 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 DNAAF1Q8NEP3 725 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 SERINC2Q96SA4 455 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 PLEKHA1Q9HB21 404 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 OR5V1Q9UGF6 321 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 ICAM5Q9UMF0 924 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 SLC22A7Q9Y694 548 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 REV3LO60673 3130 aa25.22■■□□□ 1.63
CBX4-201ENST00000269397 BRINP1O60477 761 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 FMO6PO60774 539 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 ZFPL1O95159 310 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 ECDO95905 644 aaPredicted RBP25.21■■□□□ 1.63
CBX4-201ENST00000269397 NAT1P18440 290 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 CDK2P24941 298 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 UBE2MP61081 183 aaKnown RBP25.21■■□□□ 1.63
CBX4-201ENST00000269397 PPP2CBP62714 309 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 PPP2CAP67775 309 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 OR4N2Q8NGD1 307 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 RGP1Q92546 391 aaPredicted RBP25.21■■□□□ 1.63
CBX4-201ENST00000269397 DUSP22Q9NRW4 184 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 FOXJ3Q9UPW0 622 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 BAIAP2Q9UQB8 552 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 ARPC5O15511 151 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 KCTD20Q7Z5Y7 419 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 SAMD14Q8IZD0 417 aaPredicted RBP25.21■■□□□ 1.63
CBX4-201ENST00000269397 ARPC5LQ9BPX5 153 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 PPA2Q9H2U2 334 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 EMC3Q9P0I2 261 aa25.21■■□□□ 1.63
CBX4-201ENST00000269397 AKAP7Q9P0M2 348 aaPredicted RBP25.21■■□□□ 1.63
CBX4-201ENST00000269397 SLC31A1O15431 190 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 GNRH1P01148 92 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 SOX2P48431 317 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 NDUFAF6Q330K2 333 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 UNQ9370/PRO34162Q6UXP9 181 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 THEM6Q8WUY1 208 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 TRIM43Q96BQ3 446 aaPredicted RBP25.2■■□□□ 1.63
CBX4-201ENST00000269397 RASD2Q96D21 266 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 OR2A5Q96R48 311 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 SERTAD3Q9UJW9 196 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 SLC17A4Q9Y2C5 497 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 CA5BQ9Y2D0 317 aa25.2■■□□□ 1.63
CBX4-201ENST00000269397 NUPL2O15504 423 aaKnown RBP25.2■■□□□ 1.62
CBX4-201ENST00000269397 CREBL2O60519 120 aaPredicted RBP25.2■■□□□ 1.62
CBX4-201ENST00000269397 AP3S2P59780 193 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms