RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 PIGQQ9BRB3 760 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 OR51E2Q9H255 320 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 SYT4Q9H2B2 425 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 GALNT9Q9HCQ5 603 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 P4HTMQ9NXG6 502 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 FKBP7Q9Y680 259 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 PHYHO14832 338 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 WDPCPO95876 746 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 EMP3P54852 163 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 PSG6Q00889 435 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 SCN1BQ07699 218 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 CAMK2DQ13557 499 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 FGFBP1Q14512 234 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 FAHD1Q6P587 224 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF620Q6ZNG0 422 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 NAXEQ8NCW5 288 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 IP6K3Q96PC2 410 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 PTPN6P29350 595 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 TBCEQ15813 527 aaPredicted RBP13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 PRSS53Q2L4Q9 553 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 TMEM105Q8N8V8 129 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 SPACA9Q96E40 222 aaPredicted RBP13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 PGAM5Q96HS1 289 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 C4orf36Q96KX1 117 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 ARHGDIGQ99819 225 aa13.25□□□□□ -0.29
PDLIM2-201ENST00000265810 BCAS1O75363 584 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 IGHG1P01857 330 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 HCKP08631 526 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 NFATC3Q12968 1075 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 TPRP12270 2363 aaKnown RBP13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 IQCMA0A1B0GVH7 501 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 SPAARA0A1B0GVQ0 90 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 FAM166BA8MTA8 275 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 AKR7A3O95154 331 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 APOBEC1P41238 236 aaKnown RBP13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 TRAM1Q15629 374 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 CTU2Q2VPK5 515 aaKnown RBP13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF322Q6U7Q0 402 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 LINGO2Q7L985 606 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 LOXL4Q96JB6 756 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 ALG12Q9BV10 488 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 RAB33BQ9H082 229 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 DHDHQ9UQ10 334 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 KLRC4-KLRK1H3BQV0 150 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 M0R082 166 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 CYB5AP00167 134 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 SLC35A1P78382 337 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 ARHGAP22Q7Z5H3 698 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF321PQ8N8H1 164 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF417Q8TAU3 575 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 TTC9Q92623 222 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF587Q96SQ5 575 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 ADAM18Q9Y3Q7 739 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 DOCK8Q8NF50 2099 aa13.24□□□□□ -0.29
PDLIM2-201ENST00000265810 CLDN17P56750 224 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 EBPQ15125 230 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 PLET1Q6UQ28 207 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 PRRX2Q99811 253 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 CAMK2AQ9UQM7 478 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 RGS6P49758 472 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 BIDP55957 195 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 CLDN6P56747 220 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 PNLDC1Q8NA58 520 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF511Q8NB15 262 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 TMEM178AQ8NBL3 297 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 MENTQ9BUN1 341 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 GABARAPL3Q9BY60 117 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 PCDHGA10Q9Y5H3 936 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 ZAR1LA6NP61 321 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 H3BMQ9 156 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 PTHP01270 115 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 TBXA2RP21731 343 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 PLPP5Q8NEB5 264 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 SGCZQ96LD1 299 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 COG8Q96MW5 612 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 VSTM2LQ96N03 204 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 MMP27Q9H306 513 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 A0A1W2PNR3 127 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 HTR3EA5X5Y0 456 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 RGS9O75916 674 aaPredicted RBP13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 SLC2A10O95528 541 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 MAN2A2P49641 1150 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 CARD18P57730 90 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 CLPPQ16740 277 aaPredicted RBP13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 C3orf33Q6P1S2 294 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 SLC23A3Q6PIS1 610 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 SLC35D2Q76EJ3 337 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF627Q7L945 461 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 FANCFQ9NPI8 374 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 DIABLOQ9NR28 239 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 BABAM2Q9NXR7 383 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 MYOTQ9UBF9 498 aa13.23□□□□□ -0.29
PDLIM2-201ENST00000265810 MT-ATP6P00846 226 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 ITGA5P08648 1049 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 ENTPD1P49961 510 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 PSMD7P51665 324 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 PUDPQ08623 228 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 E2F2Q14209 437 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms