RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 NLGN4YQ8NFZ3 816 aaPredicted RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 GHSRQ92847 366 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 SLC38A3Q99624 504 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 NCDNQ9UBB6 729 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 PPIEQ9UNP9 301 aaKnown RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 PRR32B1ATL7 298 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 NPIPB7O75200 414 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 BGLAPP02818 100 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 CSRP1P21291 193 aaKnown RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 AZGP1P25311 298 aaKnown RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 SDHAP31040 664 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 MRPL28Q13084 256 aaKnown RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 EBPQ15125 230 aaKnown RBP10.17□□□□□ -0.78
MSH3-201ENST00000265081 SLC36A2Q495M3 483 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 KLHL12Q53G59 568 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 DNM1P46Q6ZS02 220 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 C9orf40Q8IXQ3 194 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 TIGD4Q8IY51 512 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 SIX5Q8N196 739 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 CLDN23Q96B33 292 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 MAP6Q96JE9 813 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 MNTQ99583 582 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 RPS6KB2Q9UBS0 482 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 N6AMT1Q9Y5N5 214 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 IGLV3-12A0A075B6K2 115 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 ALAS2P22557 587 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 MNDAP41218 407 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 BTG1P62324 171 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 HSD11B2P80365 405 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 ACSM3Q53FZ2 586 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 CYB561A3Q8NBI2 242 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 CREB3L1Q96BA8 519 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 MMP28Q9H239 520 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 NEK6Q9HC98 313 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 ZNF221Q9UK13 617 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 ADAM18Q9Y3Q7 739 aa10.17□□□□□ -0.78
MSH3-201ENST00000265081 TDRD6O60522 2096 aaKnown RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 COL27A1Q8IZC6 1860 aaPredicted RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 ZNF264O43296 627 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 LYRM1O43325 122 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 CCNKO75909 580 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 TPPPO94811 219 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 MRPL3P09001 348 aaKnown RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 ATP6V1E1P36543 226 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 MMP15P51511 669 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 BAIAP2L2Q6UXY1 529 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 KANSL1Q7Z3B3 1105 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 RLN3Q8WXF3 142 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 RGP1Q92546 391 aaPredicted RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 UPRTQ96BW1 309 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 FRMD6Q96NE9 622 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 PHOX2BQ99453 314 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 RTN4RQ9BZR6 473 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 SEMA4CQ9C0C4 833 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 NXF5Q9H1B4 397 aaKnown RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 OR51V1Q9H2C8 321 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 FKRPQ9H9S5 495 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 PLEKHA1Q9HB21 404 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 PCDHGA9Q9Y5G4 932 aaKnown RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 NOTOA8MTQ0 251 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 ALG1L2C9J202 215 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 ETV2O00321 342 aaPredicted RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 EIF4E2O60573 245 aaKnown RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 CDC123O75794 336 aaPredicted RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 EPXP11678 715 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 CDKN2AP42771 156 aaKnown RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 AGFG1P52594 562 aaKnown RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 OR10A3P58181 314 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 LGALS3BPQ08380 585 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 RPTNQ6XPR3 784 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 SLC16A9Q7RTY1 509 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 KCTD20Q7Z5Y7 419 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 CEACAM19Q7Z692 300 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 OR4M1Q8NGD0 313 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 OR6S1Q8NH40 331 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 OR1L3Q8NH93 324 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 MOSPD2Q8NHP6 518 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 OTULINQ96BN8 352 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 PTDSS2Q9BVG9 487 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 TRBV5-5A0A0J9YX44 114 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 OR2W5A6NFC9 320 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 TOX3O15405 576 aaPredicted RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 UPK3AO75631 287 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 CD14P08571 375 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 CD37P11049 281 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 MYL9P24844 172 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 CSF2RBP32927 897 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 FAM27D1Q5T7N8 215 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 SLC6A19Q695T7 634 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 FDX2Q6P4F2 183 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 PLPP5Q8NEB5 264 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 OR4K13Q8NH42 304 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 MOGAT1Q96PD6 335 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 TGM7Q96PF1 710 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 TBX5Q99593 518 aa10.16□□□□□ -0.78
MSH3-201ENST00000265081 ZNF768Q9H5H4 540 aaKnown RBP10.16□□□□□ -0.78
MSH3-201ENST00000265081 A0A0G2JMP0 313 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 A0A0X1KG70 313 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 J3QLW9 94 aa10.15□□□□□ -0.78
MSH3-201ENST00000265081 CDC40O60508 579 aaKnown RBP eCLIP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms