RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 BSCL2Q96G97 398 aaPredicted RBP16.76■□□□□ 0.27
COL5A3-201ENST00000264828 CENPOQ9BU64 300 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 RAB9BQ9NP90 201 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 AIPO00170 330 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 MMP2P08253 660 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 GDNFP39905 211 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 OPCMLQ14982 345 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 AADACL3Q5VUY0 350 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 GON7Q9BXV9 100 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 PITHD1Q9GZP4 211 aaPredicted RBP16.76■□□□□ 0.27
COL5A3-201ENST00000264828 ENTPD2Q9Y5L3 495 aa16.76■□□□□ 0.27
COL5A3-201ENST00000264828 MSTNO14793 375 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 GPR137BO60478 399 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 PTHP01270 115 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 LPLP06858 475 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 SHEQ5VZ18 495 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 MKXQ8IYA7 352 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 TCEAL7Q9BRU2 100 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 ZNF286AQ9HBT8 521 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 SLAMF7Q9NQ25 335 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 GFOD1Q9NXC2 390 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 PRSS38A1L453 326 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 HIST1H1TP22492 207 aaPredicted RBP16.75■□□□□ 0.27
COL5A3-201ENST00000264828 PKLRP30613 574 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 HTR3AP46098 478 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 SLC22A25Q6T423 547 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 ESPNLQ6ZVH7 1005 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 BCDIN3DQ7Z5W3 292 aaKnown RBP16.75■□□□□ 0.27
COL5A3-201ENST00000264828 GAB3Q8WWW8 586 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 PSMF1Q92530 271 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 AIFM1O95831 613 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 CA3P07451 260 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 RPL22L1Q6P5R6 122 aaKnown RBP16.75■□□□□ 0.27
COL5A3-201ENST00000264828 TAS1R1Q7RTX1 841 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 DMBX1Q8NFW5 382 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 OR2T11Q8NH01 316 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL5A3-201ENST00000264828 ATOH8Q96SQ7 321 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 KLF16Q9BXK1 252 aaPredicted RBP16.75■□□□□ 0.27
COL5A3-201ENST00000264828 MCOLN1Q9GZU1 580 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 CAMK2AQ9UQM7 478 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 CA5BQ9Y2D0 317 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 WASH4PA8MWX3 477 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 H0Y8G0 127 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 RAB40ALP0C0E4 278 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 RGRP47804 291 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 TAS2R46P59540 309 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 RBMS2Q15434 407 aaKnown RBP16.75■□□□□ 0.27
COL5A3-201ENST00000264828 LACC1Q8IV20 430 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 RAB40AQ8WXH6 277 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 ARPC5LQ9BPX5 153 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 WWTR1Q9GZV5 400 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 METTL9Q9H1A3 318 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 MYH10P35580 1976 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 AP1G1O43747 822 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 SHC1P29353 583 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 POLR2IP36954 125 aaKnown RBP16.75■□□□□ 0.27
COL5A3-201ENST00000264828 RAP2BP61225 183 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 BRICD5Q6PL45 260 aa16.75■□□□□ 0.27
COL5A3-201ENST00000264828 SIDT1Q9NXL6 827 aaKnown RBP16.75■□□□□ 0.27
COL5A3-201ENST00000264828 C1SP09871 688 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 IL2RGP31785 369 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 OR5D18Q8NGL1 313 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 A0A087WUU8 490 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 DRGXA6NNA5 263 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 HOXA1P49639 335 aaPredicted RBP16.74■□□□□ 0.27
COL5A3-201ENST00000264828 CAMK2DQ13557 499 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 PDLIM3Q53GG5 364 aaPredicted RBP16.74■□□□□ 0.27
COL5A3-201ENST00000264828 DVL3Q92997 716 aaPredicted RBP16.74■□□□□ 0.27
COL5A3-201ENST00000264828 NECTIN4Q96NY8 510 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 CDHR4A6H8M9 788 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 FABP7O15540 132 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 SUSD5O60279 629 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 TNFSF4P23510 183 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 TAS2R30P59541 319 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 NR0B2Q15466 257 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 STEAP3Q658P3 488 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 CPNE4Q96A23 557 aaPredicted RBP16.74■□□□□ 0.27
COL5A3-201ENST00000264828 ZNF582Q96NG8 517 aaPredicted RBP16.74■□□□□ 0.27
COL5A3-201ENST00000264828 A0A0D9SG52 128 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 ADAMTS4O75173 837 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 CSO75390 466 aaKnown RBP16.74■□□□□ 0.27
COL5A3-201ENST00000264828 AOAHP28039 575 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 MPEG1Q2M385 716 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 TANGO2Q6ICL3 276 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 RFPL4BQ6ZWI9 263 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 ASB17Q8WXJ9 295 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 CPPED1Q9BRF8 314 aaPredicted RBP16.74■□□□□ 0.27
COL5A3-201ENST00000264828 SGPP1Q9BX95 441 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 ULBP2Q9BZM5 246 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 PLSCR5A0PG75 271 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 TMEM72A0PK05 275 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 PRAMEF26H0Y7S4 382 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 PTGER4P35408 488 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 FJX1Q86VR8 437 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 OR10K1Q8NGX5 313 aa16.74■□□□□ 0.27
COL5A3-201ENST00000264828 TMEM11P17152 192 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 HTR5AP47898 357 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 BAXQ07812 192 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 TUBB1Q9H4B7 451 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms