RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 C1QTNF2Q9BXJ5 285 aa15.07■□□□□ 0
GPC1-201ENST00000264039 METTL8Q9H825 291 aaKnown RBP15.07■□□□□ 0
GPC1-201ENST00000264039 OPN4Q9UHM6 478 aa15.07■□□□□ 0
GPC1-201ENST00000264039 OR5H14A6NHG9 310 aa15.06■□□□□ 0
GPC1-201ENST00000264039 FZD6O60353 706 aa15.06■□□□□ 0
GPC1-201ENST00000264039 LRG1P02750 347 aa15.06■□□□□ 0
GPC1-201ENST00000264039 ZNF28P17035 718 aa15.06■□□□□ 0
GPC1-201ENST00000264039 MAKP20794 623 aa15.06■□□□□ 0
GPC1-201ENST00000264039 GPNMBQ14956 572 aa15.06■□□□□ 0
GPC1-201ENST00000264039 ZNF620Q6ZNG0 422 aa15.06■□□□□ 0
GPC1-201ENST00000264039 SSX9Q7RTT3 188 aa15.06■□□□□ 0
GPC1-201ENST00000264039 ZNF227Q86WZ6 799 aa15.06■□□□□ 0
GPC1-201ENST00000264039 TMEM239Q8WW34 195 aa15.06■□□□□ 0
GPC1-201ENST00000264039 TCTEX1D2Q8WW35 142 aa15.06■□□□□ 0
GPC1-201ENST00000264039 SMIM3Q9BZL3 60 aa15.06■□□□□ 0
GPC1-201ENST00000264039 EIF5A2Q9GZV4 153 aaKnown RBP15.06■□□□□ 0
GPC1-201ENST00000264039 ISYNA1Q9NPH2 558 aa15.06■□□□□ 0
GPC1-201ENST00000264039 KCND3Q9UK17 655 aa15.06■□□□□ 0
GPC1-201ENST00000264039 PLSCR5A0PG75 271 aa15.06■□□□□ 0
GPC1-201ENST00000264039 DCDC2BA2VCK2 349 aa15.06■□□□□ 0
GPC1-201ENST00000264039 ARRDC5A6NEK1 342 aa15.06■□□□□ 0
GPC1-201ENST00000264039 OR2W5A6NFC9 320 aa15.06■□□□□ 0
GPC1-201ENST00000264039 SERPINA5P05154 406 aa15.06■□□□□ 0
GPC1-201ENST00000264039 HPGDP15428 266 aa15.06■□□□□ 0
GPC1-201ENST00000264039 NME2P22392 152 aa15.06■□□□□ 0
GPC1-201ENST00000264039 CCKBRP32239 447 aa15.06■□□□□ 0
GPC1-201ENST00000264039 CBARPQ8N350 705 aaPredicted RBP15.06■□□□□ 0
GPC1-201ENST00000264039 OR4C16Q8NGL9 310 aa15.06■□□□□ 0
GPC1-201ENST00000264039 ST7LQ8TDW4 575 aa15.06■□□□□ 0
GPC1-201ENST00000264039 CDS1Q92903 461 aa15.06■□□□□ 0
GPC1-201ENST00000264039 ARL5BQ96KC2 179 aa15.06■□□□□ 0
GPC1-201ENST00000264039 CNN2Q99439 309 aaKnown RBP15.06■□□□□ 0
GPC1-201ENST00000264039 CMKLR1Q99788 373 aa15.06■□□□□ 0
GPC1-201ENST00000264039 SLC19A3Q9BZV2 496 aa15.06■□□□□ 0
GPC1-201ENST00000264039 CHST6Q9GZX3 395 aa15.06■□□□□ 0
GPC1-201ENST00000264039 CD3DP04234 171 aa15.06■□□□□ 0
GPC1-201ENST00000264039 LIMS1P48059 325 aa15.06■□□□□ 0
GPC1-201ENST00000264039 AADACL4Q5VUY2 407 aa15.06■□□□□ 0
GPC1-201ENST00000264039 BAIAP2L2Q6UXY1 529 aa15.06■□□□□ 0
GPC1-201ENST00000264039 TMEM173Q86WV6 379 aaPredicted RBP15.06■□□□□ 0
GPC1-201ENST00000264039 TEX19Q8NA77 164 aa15.06■□□□□ 0
GPC1-201ENST00000264039 OR6N2Q8NGY6 317 aa15.06■□□□□ 0
GPC1-201ENST00000264039 NUBPLQ8TB37 319 aa15.06■□□□□ 0
GPC1-201ENST00000264039 ISOC2Q96AB3 205 aa15.06■□□□□ 0
GPC1-201ENST00000264039 OR7D2Q96RA2 312 aa15.06■□□□□ 0
GPC1-201ENST00000264039 POTEKPQ9BYX7 375 aa15.06■□□□□ 0
GPC1-201ENST00000264039 NRIP3Q9NQ35 241 aa15.06■□□□□ 0
GPC1-201ENST00000264039 TMEM82A0PJX8 343 aa15.05■□□□□ 0
GPC1-201ENST00000264039 CD80P33681 288 aa15.05■□□□□ 0
GPC1-201ENST00000264039 PTGFRP43088 359 aa15.05■□□□□ 0
GPC1-201ENST00000264039 HAAOP46952 286 aa15.05■□□□□ 0
GPC1-201ENST00000264039 NKAPLQ5M9Q1 402 aa15.05■□□□□ 0
GPC1-201ENST00000264039 NIPAL3Q6P499 406 aa15.05■□□□□ 0
GPC1-201ENST00000264039 MAMSTRQ6ZN01 415 aa15.05■□□□□ 0
GPC1-201ENST00000264039 ZNF600Q6ZNG1 722 aa15.05■□□□□ 0
GPC1-201ENST00000264039 TMEM200AQ86VY9 491 aa15.05■□□□□ 0
GPC1-201ENST00000264039 CPXM2Q8N436 756 aa15.05■□□□□ 0
GPC1-201ENST00000264039 ARIH2OSQ8N7S6 290 aa15.05■□□□□ 0
GPC1-201ENST00000264039 ZNF511Q8NB15 262 aa15.05■□□□□ 0
GPC1-201ENST00000264039 SLC16A11Q8NCK7 471 aa15.05■□□□□ 0
GPC1-201ENST00000264039 PIGMQ9H3S5 423 aa15.05■□□□□ 0
GPC1-201ENST00000264039 POFUT1Q9H488 388 aa15.05■□□□□ 0
GPC1-201ENST00000264039 RGCCQ9H4X1 137 aa15.05■□□□□ 0
GPC1-201ENST00000264039 POLMQ9NP87 494 aaPredicted RBP15.05■□□□□ 0
GPC1-201ENST00000264039 F5P12259 2224 aa15.05■□□□□ 0
GPC1-201ENST00000264039 SCN4AP35499 1836 aa15.05■□□□□ -0
GPC1-201ENST00000264039 SEC14L5O43304 696 aa15.05■□□□□ -0
GPC1-201ENST00000264039 SLC25A12O75746 678 aa15.05■□□□□ -0
GPC1-201ENST00000264039 EIF3GO75821 320 aaKnown RBP eCLIP15.05■□□□□ -0
GPC1-201ENST00000264039 SFTPBP07988 381 aa15.05■□□□□ -0
GPC1-201ENST00000264039 P2RX1P51575 399 aa15.05■□□□□ -0
GPC1-201ENST00000264039 B3GNTL1Q67FW5 361 aaPredicted RBP15.05■□□□□ -0
GPC1-201ENST00000264039 OR56A3Q8NH54 315 aa15.05■□□□□ -0
GPC1-201ENST00000264039 SLC25A28Q96A46 364 aa15.05■□□□□ -0
GPC1-201ENST00000264039 ZBTB8AQ96BR9 441 aa15.05■□□□□ -0
GPC1-201ENST00000264039 JAM3Q9BX67 310 aa15.05■□□□□ -0
GPC1-201ENST00000264039 ZFP57Q9NU63 452 aa15.05■□□□□ -0
GPC1-201ENST00000264039 CA5BQ9Y2D0 317 aa15.05■□□□□ -0
GPC1-201ENST00000264039 YIPF1Q9Y548 306 aa15.05■□□□□ -0
GPC1-201ENST00000264039 DSPPQ9NZW4 1301 aa15.05■□□□□ -0
GPC1-201ENST00000264039 TUBAL3A6NHL2 446 aa15.05■□□□□ -0
GPC1-201ENST00000264039 NUDT14O95848 222 aa15.05■□□□□ -0
GPC1-201ENST00000264039 NME1P15531 152 aaKnown RBP15.05■□□□□ -0
GPC1-201ENST00000264039 MAP3K8P41279 467 aa15.05■□□□□ -0
GPC1-201ENST00000264039 CXADRP78310 365 aa15.05■□□□□ -0
GPC1-201ENST00000264039 ILF3Q12906 894 aaKnown RBP eCLIP15.05■□□□□ -0
GPC1-201ENST00000264039 AMZ1Q400G9 498 aa15.05■□□□□ -0
GPC1-201ENST00000264039 OR7E24Q6IFN5 339 aa15.05■□□□□ -0
GPC1-201ENST00000264039 JAZF1Q86VZ6 243 aa15.05■□□□□ -0
GPC1-201ENST00000264039 PEX11GQ96HA9 241 aa15.05■□□□□ -0
GPC1-201ENST00000264039 COMMD4Q9H0A8 199 aa15.05■□□□□ -0
GPC1-201ENST00000264039 SCN2AQ99250 2005 aa15.04■□□□□ -0
GPC1-201ENST00000264039 KDM4EB2RXH2 506 aaPredicted RBP15.04■□□□□ -0
GPC1-201ENST00000264039 SCGB1D2O95969 90 aa15.04■□□□□ -0
GPC1-201ENST00000264039 TMIGD3P0DMS9 266 aaPredicted RBP15.04■□□□□ -0
GPC1-201ENST00000264039 DAOP14920 347 aa15.04■□□□□ -0
GPC1-201ENST00000264039 DDX6P26196 483 aaKnown RBP eCLIP15.04■□□□□ -0
GPC1-201ENST00000264039 LIMK1P53667 647 aa15.04■□□□□ -0
GPC1-201ENST00000264039 H2BFSP57053 126 aa15.04■□□□□ -0
GPC1-201ENST00000264039 TAS2R20P59543 309 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms