RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FFAR1O14842 300 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 ZNF208O43345 1280 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 ENPP1P22413 925 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 PTGER4P35408 488 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 AGFG1P52594 562 aaKnown RBP16.41■□□□□ 0.22
SDF4-201ENST00000263741 CDSNQ15517 529 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 ZNF239Q16600 458 aaKnown RBP16.41■□□□□ 0.22
SDF4-201ENST00000263741 KTI12Q96EK9 354 aaPredicted RBP16.41■□□□□ 0.22
SDF4-201ENST00000263741 DUS3LQ96G46 650 aaKnown RBP16.41■□□□□ 0.22
SDF4-201ENST00000263741 PYURFQ96I23 114 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 Q9UFV3 132 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 CLEC4AQ9UMR7 237 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 A0A087WUJ7 227 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 SULT2B1O00204 365 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 CHP2O43745 196 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 RPS5P46782 204 aaKnown RBP16.41■□□□□ 0.22
SDF4-201ENST00000263741 OR2B6P58173 313 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 FOXF2Q12947 444 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 C6orf52Q5T4I8 152 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 C1orf140Q5VVS0 124 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 TMPPEQ6ZT21 453 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 NKAIN4Q8IVV8 208 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 ABHD3Q8WU67 409 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 PRRC1Q96M27 445 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 PRSS27Q9BQR3 290 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 UBAP1Q9NZ09 502 aa16.41■□□□□ 0.22
SDF4-201ENST00000263741 TCRBV3S1A0A5B6 114 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 MBD3L4A6NDZ8 208 aaPredicted RBP16.4■□□□□ 0.22
SDF4-201ENST00000263741 MBD3L3A6NE82 208 aaPredicted RBP16.4■□□□□ 0.22
SDF4-201ENST00000263741 MBD3L5A6NJ08 208 aaPredicted RBP16.4■□□□□ 0.22
SDF4-201ENST00000263741 A8MVM7 634 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 ZNF814B7Z6K7 855 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 LDLRP01130 860 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 SEMG1P04279 462 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 PNMTP11086 282 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 CBLP22681 906 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 OR7A5Q15622 319 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 MBD3L2Q8NHZ7 208 aaPredicted RBP16.4■□□□□ 0.22
SDF4-201ENST00000263741 INTS12Q96CB8 462 aaKnown RBP16.4■□□□□ 0.22
SDF4-201ENST00000263741 C7orf34Q96L11 122 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 PRRG4Q9BZD6 226 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 MUC13Q9H3R2 512 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 CALHM2Q9HA72 323 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 NDUFAF4Q9P032 175 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 RNF6Q9Y252 685 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 ICE1Q9Y2F5 2266 aa16.4■□□□□ 0.22
SDF4-201ENST00000263741 LRRN3E7EW58 273 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 SMAD9O15198 467 aaKnown RBP16.39■□□□□ 0.21
SDF4-201ENST00000263741 RAMP1O60894 148 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 NPIPB7O75200 414 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 SYNGR4O95473 234 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 IDUAP35475 653 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 NR1H2P55055 460 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 PDSS1Q5T2R2 415 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 ALDH16A1Q8IZ83 802 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 FAM26EQ8N5C1 309 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 TMEM255BQ8WV15 326 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 RND1Q92730 232 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 CPNE4Q96A23 557 aaPredicted RBP16.39■□□□□ 0.21
SDF4-201ENST00000263741 SDCCAG3Q96C92 435 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 PTDSS2Q9BVG9 487 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 C12orf10Q9HB07 376 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 SEC14L4Q9UDX3 406 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 MCTS1Q9ULC4 181 aaKnown RBP16.39■□□□□ 0.21
SDF4-201ENST00000263741 HDGFL3Q9Y3E1 203 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 ENPP4Q9Y6X5 453 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 CCDC160A6NGH7 325 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 PRSS23O95084 383 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 OR5F1O95221 314 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 HOXD4P09016 255 aaPredicted RBP16.39■□□□□ 0.21
SDF4-201ENST00000263741 FPR1P21462 350 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 PER3P56645 1201 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 LSM11P83369 360 aaKnown RBP eCLIP16.39■□□□□ 0.216e-7■■■■■ 27.8
SDF4-201ENST00000263741 MYBPC1Q00872 1141 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 WNT2BQ93097 391 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 SLC25A36Q96CQ1 311 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 MAN2C1Q9NTJ4 1040 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 ZNF175Q9Y473 711 aa16.39■□□□□ 0.21
SDF4-201ENST00000263741 AHSA1O95433 338 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 RAC3P60763 192 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 APOFQ13790 326 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 SF3B4Q15427 424 aaKnown RBP eCLIP16.38■□□□□ 0.218e-8■■■■□ 20.5
SDF4-201ENST00000263741 TMEM211Q6ICI0 200 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 ITLN2Q8WWU7 325 aaPredicted RBP16.38■□□□□ 0.21
SDF4-201ENST00000263741 TAAR8Q969N4 342 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 GRIP2Q9C0E4 1043 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 KLHL13Q9P2N7 655 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 USP9YO00507 2555 aaPredicted RBP16.38■□□□□ 0.21
SDF4-201ENST00000263741 CLEC18AA5D8T8 446 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 LIPT2A6NK58 231 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 PIP5K1CO60331 668 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 AKR7A3O95154 331 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 PMS2P2O95744 297 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 IL2RAP01589 272 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 TFAP2AP05549 437 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 UGT2B15P54855 530 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 SIRPAP78324 504 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 IQCCQ4KMZ1 466 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 KRT80Q6KB66 452 aa16.38■□□□□ 0.21
SDF4-201ENST00000263741 CLEC18BQ6UXF7 455 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms