RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SECISBP2Q96T21 854 aaKnown RBP12.01□□□□□ -0.49
SGCA-201ENST00000262018 DGCR6LQ9BY27 220 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.01□□□□□ -0.49
SGCA-201ENST00000262018 ZNF223Q9UK11 482 aaPredicted RBP12.01□□□□□ -0.49
SGCA-201ENST00000262018 OR10H1Q9Y4A9 318 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 PINLYPA6NC86 204 aa12□□□□□ -0.49
SGCA-201ENST00000262018 CPSF4LA6NMK7 179 aaKnown RBP12□□□□□ -0.49
SGCA-201ENST00000262018 HAX1O00165 279 aa12□□□□□ -0.49
SGCA-201ENST00000262018 AHCYL1O43865 530 aa12□□□□□ -0.49
SGCA-201ENST00000262018 FMO6PO60774 539 aa12□□□□□ -0.49
SGCA-201ENST00000262018 MRPS14O60783 128 aaKnown RBP12□□□□□ -0.49
SGCA-201ENST00000262018 CYP7B1O75881 506 aa12□□□□□ -0.49
SGCA-201ENST00000262018 F12P00748 615 aaPredicted RBP12□□□□□ -0.49
SGCA-201ENST00000262018 CYP4B1P13584 511 aa12□□□□□ -0.49
SGCA-201ENST00000262018 BMP5P22003 454 aa12□□□□□ -0.49
SGCA-201ENST00000262018 ISL1P61371 349 aa12□□□□□ -0.49
SGCA-201ENST00000262018 PLAURQ03405 335 aa12□□□□□ -0.49
SGCA-201ENST00000262018 CD47Q08722 323 aa12□□□□□ -0.49
SGCA-201ENST00000262018 FGFBP1Q14512 234 aa12□□□□□ -0.49
SGCA-201ENST00000262018 TRAM2Q15035 370 aa12□□□□□ -0.49
SGCA-201ENST00000262018 EBPQ15125 230 aaKnown RBP12□□□□□ -0.49
SGCA-201ENST00000262018 DECR1Q16698 335 aa12□□□□□ -0.49
SGCA-201ENST00000262018 PDZK1Q5T2W1 519 aa12□□□□□ -0.49
SGCA-201ENST00000262018 PGBD2Q6P3X8 592 aa12□□□□□ -0.49
SGCA-201ENST00000262018 PLEKHM3Q6ZWE6 761 aa12□□□□□ -0.49
SGCA-201ENST00000262018 RANBP3LQ86VV4 465 aaPredicted RBP12□□□□□ -0.49
SGCA-201ENST00000262018 CMIPQ8IY22 773 aa12□□□□□ -0.49
SGCA-201ENST00000262018 ARMC10Q8N2F6 343 aa12□□□□□ -0.49
SGCA-201ENST00000262018 TMEM156Q8N614 296 aa12□□□□□ -0.49
SGCA-201ENST00000262018 TOR1AIP2Q8NFQ8 470 aa12□□□□□ -0.49
SGCA-201ENST00000262018 OR5L2Q8NGL0 311 aa12□□□□□ -0.49
SGCA-201ENST00000262018 HDAC2Q92769 488 aaKnown RBP12□□□□□ -0.49
SGCA-201ENST00000262018 SLC38A4Q969I6 547 aa12□□□□□ -0.49
SGCA-201ENST00000262018 LCORQ96JN0 433 aaPredicted RBP12□□□□□ -0.49
SGCA-201ENST00000262018 HRASLS5Q96KN8 279 aa12□□□□□ -0.49
SGCA-201ENST00000262018 TUBA1CQ9BQE3 449 aa12□□□□□ -0.49
SGCA-201ENST00000262018 PRR14Q9BWN1 585 aa12□□□□□ -0.49
SGCA-201ENST00000262018 NXF5Q9H1B4 397 aaKnown RBP12□□□□□ -0.49
SGCA-201ENST00000262018 ZDHHC11Q9H8X9 412 aa12□□□□□ -0.49
SGCA-201ENST00000262018 TIMMDC1Q9NPL8 285 aa12□□□□□ -0.49
SGCA-201ENST00000262018 DEPPQ9NTK1 212 aa12□□□□□ -0.49
SGCA-201ENST00000262018 GMPPBQ9Y5P6 360 aa12□□□□□ -0.49
SGCA-201ENST00000262018 A0A1W2PPR1 153 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 HSPB2A8KAH6 182 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 DVL2O14641 736 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 TO15178 435 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 OR10H3O60404 316 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 IL33O95760 270 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 IFNA2P01563 188 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 HRGP04196 525 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 EPHA2P29317 976 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 LCN1P31025 176 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 RFX3P48380 749 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 UGT2B15P54855 530 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 GABARAPL2P60520 117 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 CSNK2BP67870 215 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 RNF4P78317 190 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 RPP38P78345 283 aaKnown RBP11.99□□□□□ -0.49
SGCA-201ENST00000262018 HOXC5Q00444 222 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 HSPB2Q16082 182 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 NNATQ16517 81 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 CTU2Q2VPK5 515 aaKnown RBP11.99□□□□□ -0.49
SGCA-201ENST00000262018 KLHL17Q6TDP4 642 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 PRSS57Q6UWY2 283 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 CD300LDQ6UXZ3 194 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 SLC29A4Q7RTT9 530 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 C9orf40Q8IXQ3 194 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 NUBPLQ8TB37 319 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 ZFAND2BQ8WV99 257 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 GTPBP3Q969Y2 492 aaKnown RBP11.99□□□□□ -0.49
SGCA-201ENST00000262018 SLC41A3Q96GZ6 507 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 APOL4Q9BPW4 351 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 HOXD1Q9GZZ0 328 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 CTPS2Q9NRF8 586 aa11.99□□□□□ -0.49
SGCA-201ENST00000262018 TESQ9UGI8 421 aaKnown RBP11.99□□□□□ -0.49
SGCA-201ENST00000262018 FOXD3Q9UJU5 478 aaPredicted RBP11.99□□□□□ -0.49
SGCA-201ENST00000262018 A0A087WUU8 490 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 C2orf92A0A1B0GVN3 265 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 THY1P04216 161 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 TFAP2AP05549 437 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 ELK4P28324 431 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 GGT2P36268 569 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 FBXL19-AS1Q494R0 122 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 C6orf141Q5SZD1 244 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 C1orf94Q6P1W5 598 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 TRILQ7L0X0 811 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 SLC22A16Q86VW1 577 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 KIF18BQ86Y91 864 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 ZNF441Q8N8Z8 693 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 C17orf47Q8NEP4 570 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 OR2M7Q8NG81 312 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 OR4K5Q8NGD3 323 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 CNOT9Q92600 299 aaKnown RBP11.98□□□□□ -0.49
SGCA-201ENST00000262018 PERPQ96FX8 193 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
SGCA-201ENST00000262018 PTTG2Q9NZH5 202 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 MYOTQ9UBF9 498 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 REV1Q9UBZ9 1251 aa11.98□□□□□ -0.49
SGCA-201ENST00000262018 MRTO4Q9UKD2 239 aaKnown RBP11.98□□□□□ -0.49
SGCA-201ENST00000262018 TRAPPC13A5PLN9 417 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms