RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ZNF547Q8IVP9 402 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 CYB561A3Q8NBI2 242 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 OR4D10Q8NGI6 311 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 BPIFA2Q96DR5 249 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 PDCD1LG2Q9BQ51 273 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 TRMT61BQ9BVS5 477 aaKnown RBP10.59□□□□□ -0.71
TROAP-201ENST00000257909 STARD7Q9NQZ5 370 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 POT1Q9NUX5 634 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 C14orf105Q9NVL8 296 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 IL36AQ9UHA7 158 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 SCN5AQ14524 2016 aa10.59□□□□□ -0.71
TROAP-201ENST00000257909 A0A1W2PR48 441 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 H7C417 338 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 PPM1DO15297 605 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 PIN1P1O15428 100 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 CTNSO60931 367 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 RPN2P04844 631 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 CSF1P09603 554 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 C8orf89P0DMQ9 161 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 RFC3P40938 356 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 FNTBP49356 437 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 PCGF3Q3KNV8 242 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 FCRLBQ6BAA4 426 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 SLC48A1Q6P1K1 146 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 FIP1L1Q6UN15 594 aaKnown RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 ZNF600Q6ZNG1 722 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 SPAG16Q8N0X2 631 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ARMC10Q8N2F6 343 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 RFLNBQ8N5W9 214 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 TMEM185AQ8NFB2 350 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 VN1R2Q8NFZ6 395 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 OR13C2Q8NGS9 318 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 TFGQ92734 400 aaPredicted RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 SLC35A4Q96G79 324 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 CNN2Q99439 309 aaKnown RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 TTTY10Q9BZA0 68 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 MTFP1Q9UDX5 166 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 GNG8Q9UK08 70 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 FBXL4Q9UKA2 621 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 WDR45Q9Y484 360 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 IRAK3Q9Y616 596 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 HEATR5BQ9P2D3 2071 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 OR6C74A6NCV1 312 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 LCMT2O60294 686 aaKnown RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 PAK4O96013 591 aaPredicted RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 GYPBP06028 91 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 THBS1P07996 1170 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 PTHLHP12272 177 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ACHEP22303 614 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 PSMB5P28074 263 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 NDUFS1P28331 727 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 GABRR2P28476 465 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 CLDN12P56749 244 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 EEF1A1P68104 462 aaKnown RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 DUSP8Q13202 625 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ZNF345Q14585 488 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 TCTN1Q2MV58 587 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ZNF528Q3MIS6 628 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 SPOUT1Q5T280 376 aaKnown RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 ARHGAP11AQ6P4F7 1023 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 WDR88Q6ZMY6 472 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 SLC43A2Q8N370 569 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 OR4C16Q8NGL9 310 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ARMC5Q96C12 935 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 LRIG1Q96JA1 1093 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 LRFN5Q96NI6 719 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 IER2Q9BTL4 223 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 VN1R3Q9BXE9 311 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 SLITRK2Q9H156 845 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ALX4Q9H161 411 aaPredicted RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 SLC25A18Q9H1K4 315 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ZNF768Q9H5H4 540 aaKnown RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 ZNF281Q9Y2X9 895 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.58□□□□□ -0.72
TROAP-201ENST00000257909 MED31Q9Y3C7 131 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 ATG4BQ9Y4P1 393 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 INSL5Q9Y5Q6 135 aa10.58□□□□□ -0.72
TROAP-201ENST00000257909 TMEM218A2RU14 115 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 MAGEB4O15481 346 aaPredicted RBP10.57□□□□□ -0.72
TROAP-201ENST00000257909 GLSO94925 669 aaPredicted RBP10.57□□□□□ -0.72
TROAP-201ENST00000257909 OR2F2O95006 317 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 PAPLNO95428 1278 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 PPP1R3DO95685 299 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 CTSLP07711 333 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 EPCAMP16422 314 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 HIST1H1TP22492 207 aaPredicted RBP10.57□□□□□ -0.72
TROAP-201ENST00000257909 GPR1P46091 355 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 HCCSP53701 268 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 UBE2MP61081 183 aaKnown RBP10.57□□□□□ -0.72
TROAP-201ENST00000257909 POLR2GP62487 172 aaKnown RBP eCLIP10.57□□□□□ -0.72
TROAP-201ENST00000257909 CSNK1G2P78368 415 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 OR2F1Q13607 317 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 GGTLC2Q14390 218 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 OR1Q1Q15612 314 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 CEBPEQ15744 281 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 FAM74A1Q5RGS3 127 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 DHRS7BQ6IAN0 325 aaPredicted RBP10.57□□□□□ -0.72
TROAP-201ENST00000257909 MRM1Q6IN84 353 aaKnown RBP10.57□□□□□ -0.72
TROAP-201ENST00000257909 SLC35F2Q8IXU6 374 aa10.57□□□□□ -0.72
TROAP-201ENST00000257909 PUSL1Q8N0Z8 303 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms