RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 GABRR1P24046 479 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 ITGB8P26012 769 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 AQP2P41181 271 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 HTR5AP47898 357 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 PIWIL3Q7Z3Z3 882 aaKnown RBP17.58■□□□□ 0.41
PTPRE-201ENST00000254667 ZFAND1Q8TCF1 268 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 CENPOQ9BU64 300 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 DUSP22Q9NRW4 184 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 DVL2O14641 736 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 TFP02787 698 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 FKBP2P26885 142 aaKnown RBP17.58■□□□□ 0.41
PTPRE-201ENST00000254667 SLC1A3P43003 542 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 LTBQ06643 244 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 SQSTM1Q13501 440 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 LHX8Q68G74 356 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 CCDC28AQ8IWP9 274 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 GPR78Q96P69 363 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 NUDT22Q9BRQ3 303 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 PPIL3Q9H2H8 161 aaKnown RBP17.58■□□□□ 0.41
PTPRE-201ENST00000254667 PSORS1C1Q9UIG5 152 aa17.58■□□□□ 0.41
PTPRE-201ENST00000254667 MT-CO2P00403 227 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 DBHP09172 617 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 SPOCK1Q08629 439 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 ELAVL1Q15717 326 aaKnown RBP17.58■□□□□ 0.4
PTPRE-201ENST00000254667 UBE2NLQ5JXB2 153 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 TSSK4Q6SA08 328 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF767PQ75MW2 155 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 GIMAP5Q96F15 307 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 WDR76Q9H967 626 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 USP22Q9UPT9 525 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 GPR171O14626 319 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 SEC14L2O76054 403 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 MTHFD2P13995 350 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 COX20Q5RI15 118 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 AKR1C8PQ5T2L2 129 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 PRAMEF20Q5VT98 475 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 FAM57BQ71RH2 274 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 NDUFAF7Q7L592 441 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 FUNDC1Q8IVP5 155 aa17.58■□□□□ 0.4
PTPRE-201ENST00000254667 C6orf106Q9H6K1 298 aaPredicted RBP17.58■□□□□ 0.4
PTPRE-201ENST00000254667 A8MVM7 634 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 PRRT4C9JH25 899 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 D6RAR5 112 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 TCN2P20062 427 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 GDF7Q7Z4P5 450 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 OR1S1Q8NH92 325 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 FNDC9Q8TBE3 224 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 MS4A6EQ96DS6 147 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 RSPRY1Q96DX4 576 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 WASH6PQ9NQA3 447 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 ACOT8O14734 319 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF749O43361 778 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 HPGDSO60760 199 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 TAS2R20P59543 309 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 SLC36A2Q495M3 483 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 GTPBP8Q8N3Z3 284 aaPredicted RBP17.57■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF582Q96NG8 517 aaPredicted RBP17.57■□□□□ 0.4
PTPRE-201ENST00000254667 SULT4A1Q9BR01 284 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 TSPAN10Q9H1Z9 355 aaPredicted RBP17.57■□□□□ 0.4
PTPRE-201ENST00000254667 ATP13A2Q9NQ11 1180 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 DIMT1Q9UNQ2 313 aaKnown RBP17.57■□□□□ 0.4
PTPRE-201ENST00000254667 NOSIPQ9Y314 301 aaKnown RBP17.57■□□□□ 0.4
PTPRE-201ENST00000254667 LAMB1P07942 1786 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 PCP4L1A6NKN8 68 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 ARPC1BO15143 372 aaKnown RBP17.57■□□□□ 0.4
PTPRE-201ENST00000254667 DDAH2O95865 285 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 MT-ATP6P00846 226 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 GAAP10253 952 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF44P15621 663 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 CX3CR1P49238 355 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 SIRPAP78324 504 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 PLK5Q496M5 336 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 Q6ZNB5 142 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 COQ10AQ96MF6 247 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 C1QTNF3Q9BXJ4 246 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 SLAMF7Q9NQ25 335 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 PLEKHM1Q9Y4G2 1056 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 KLK4Q9Y5K2 254 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 OR1D5P58170 312 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 ACTBL2Q562R1 376 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 FAM83FQ8NEG4 500 aaPredicted RBP17.57■□□□□ 0.4
PTPRE-201ENST00000254667 PIGCQ92535 297 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 TUBB1Q9H4B7 451 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 OBP2BQ9NPH6 170 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 B3GNT2Q9NY97 397 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 CD300AQ9UGN4 299 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 COL18A1P39060 1754 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 KLRC4-KLRK1H3BQV0 150 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 K7ESM1 405 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 ENPP1P22413 925 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 HTR1FP30939 366 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 SLC6A12P48065 614 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 LINC01599Q8WXQ3 324 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 OR51J1Q9H342 316 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 DAPP1Q9UN19 280 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
PTPRE-201ENST00000254667 DDX60LQ5H9U9 1706 aaKnown RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 TMEM202A6NGA9 273 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 PRKRAO75569 313 aaKnown RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 SRFP11831 508 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms