RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 A0A1B0GTQ1 180 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 PATE3B3GLJ2 98 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 BLOC1S5-TXNDC5H3BN57 136 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 SELENOFO60613 162 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 CCNKO75909 580 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 UTS2O95399 124 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 UBL4AP11441 157 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 F8A1P23610 371 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 NR4A2P43354 598 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 FOXL2P58012 376 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 ZSWIM7Q19AV6 140 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 VWA2Q5GFL6 755 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 C10orf53Q8N6V4 93 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 SLC2A12Q8TD20 617 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 CNN2Q99439 309 aaKnown RBP17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 RAB33BQ9H082 229 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 ST6GALNAC2Q9UJ37 374 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 COPS3Q9UNS2 423 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 ZNF337Q9Y3M9 751 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 A0A1B0GVC2 190 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 A6NIN4 97 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 ELOA3DA6NLF2 546 aaPredicted RBP17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 A8MV72 311 aaPredicted RBP17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 FAM25AB3EWG3 89 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 FAM25CB3EWG5 89 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 FAM25GB3EWG6 89 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 FOLR1P15328 257 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 CSF2RBP32927 897 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 AQP2P41181 271 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 ACTC1P68032 377 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 ACTA1P68133 377 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 ELOA3BQ3SY89 546 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 C1orf189Q5VU69 101 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 DMKNQ6E0U4 476 aaPredicted RBP17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 DPY19L2P2Q6ZN68 376 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 RAB43Q86YS6 212 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 ELOA3Q8NG57 546 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 OR7G1Q8NGA0 311 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 OR6K6Q8NGW6 343 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 GAREM1Q9H706 876 aa17.07■□□□□ 0.32
PDLIM4-201ENST00000253754 SEC16AO15027 2179 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 CACNA1HO95180 2353 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 SCDO00767 359 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 SEC14L5O43304 696 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 IL33O95760 270 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 DDAH2O95865 285 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 GRPRP30550 384 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 ARL4DP49703 201 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 RPS4XP62701 263 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 POU4F2Q12837 409 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 MZT2AQ6P582 158 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 ATG4DQ86TL0 474 aaPredicted RBP17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 SLC35F2Q8IXU6 374 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 SAP25Q8TEE9 199 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 PELI1Q96FA3 418 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 ZC3H10Q96K80 434 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 PELOQ9BRX2 385 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 NRIP3Q9NQ35 241 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 FBXO4Q9UKT5 387 aa17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 RBMX2Q9Y388 322 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-201ENST00000253754 IGKV3D-11A0A0A0MRZ8 115 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 TEX13CA0A0J9YWL9 993 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 DUX1O43812 170 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 ICOSLGO75144 302 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 PPM1BO75688 479 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 SPI1P17947 270 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 GALNSP34059 522 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 THBS2P35442 1172 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 KIR2DL3P43628 341 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 PPICP45877 212 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 HSD11B2P80365 405 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 LPAL2Q16609 132 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 ACSM3Q53FZ2 586 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 HBMQ6B0K9 141 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 WBP2NLQ6ICG8 309 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 KANSL1Q7Z3B3 1105 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 SYT9Q86SS6 491 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 OR2I1PQ8NGU4 316 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 ZNF721Q8TF20 911 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 CHAC2Q8WUX2 184 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 DDOQ99489 341 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 NUDT9Q9BW91 350 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 ACOXLQ9NUZ1 547 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 KLHL21Q9UJP4 597 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 RASD1Q9Y272 281 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 PSMD9O00233 223 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 SC5DO75845 299 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 PAHP00439 452 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 IGKV3-11P04433 115 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 ZNF24P17028 368 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 TAS2R43P59537 309 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 EGR4Q05215 589 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 PON3Q15166 354 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 SLC25A35Q3KQZ1 300 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 LCN1P1Q5VSP4 162 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 RSBN1Q5VWQ0 802 aaPredicted RBP17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 TRIQKQ629K1 86 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 SFXN4Q6P4A7 337 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 PLXDC1Q8IUK5 500 aa17.05■□□□□ 0.32
PDLIM4-201ENST00000253754 SLC43A2Q8N370 569 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms