RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 IER3IP1Q9Y5U9 82 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 CEP250Q9BV73 2442 aa13.77□□□□□ -0.2
HDHD3-201ENST00000238379 ANKRD33BA6NCL7 494 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 RIIAD1A6NNX1 92 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 MT-ATP6P00846 226 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 PSMB9P28065 219 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 NOS3P29474 1203 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 HTR1FP30939 366 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 RPL4P36578 427 aaKnown RBP13.77□□□□□ -0.21
HDHD3-201ENST00000238379 RAB40BQ12829 278 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 ITGADQ13349 1161 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 CRMP1Q14194 572 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 TGIF1Q15583 401 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 DCAF10Q5QP82 559 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 FAM69AQ5T7M9 428 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 C1orf140Q5VVS0 124 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 RNLSQ5VYX0 342 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 IGF2-ASQ6U949 168 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 C5orf46Q6UWT4 87 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 GALNT15Q8N3T1 639 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 THOC3Q96J01 351 aaKnown RBP13.77□□□□□ -0.21
HDHD3-201ENST00000238379 MRGPRX4Q96LA9 322 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 SGCZQ96LD1 299 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 DOK1Q99704 481 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 MED20Q9H944 212 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 FGF20Q9NP95 211 aaPredicted RBP13.77□□□□□ -0.21
HDHD3-201ENST00000238379 DIMT1Q9UNQ2 313 aaKnown RBP13.77□□□□□ -0.21
HDHD3-201ENST00000238379 PTPRBP23467 1997 aa13.77□□□□□ -0.21
HDHD3-201ENST00000238379 PRR23D1E9PI22 279 aaPredicted RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 IDH3BO43837 385 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 PRR23D2P0DMB1 279 aaPredicted RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 JMJD6Q6NYC1 403 aaPredicted RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 NIPAL3Q6P499 406 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 TMPRSS7Q7RTY8 843 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 MDGA2Q7Z553 956 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 NANOGNBQ7Z5D8 188 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 PLCZ1Q86YW0 608 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 SLC37A3Q8NCC5 494 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 POC1BQ8TC44 478 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 OTULINQ96BN8 352 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 C1GALT1C1Q96EU7 318 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 DNAJA3Q96EY1 480 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 CRELD1Q96HD1 420 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 IP6K3Q96PC2 410 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 KATNB1Q9BVA0 655 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 FUNDC2Q9BWH2 189 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 GPN2Q9H9Y4 310 aaPredicted RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 H2AFY2Q9P0M6 372 aaPredicted RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 WARS2Q9UGM6 360 aaKnown RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 CLEC2DQ9UHP7 191 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 CPAMD8Q8IZJ3 1885 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 EML6Q6ZMW3 1958 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 DOCK10Q96BY6 2186 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 IRGMA1A4Y4 181 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 EFNA2O43921 213 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 TRMUO75648 421 aaKnown RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 APOL3O95236 402 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 RAB36O95755 333 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 IFNGP01579 166 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 HIST1H2ABP04908 130 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 HIST1H1CP16403 213 aaKnown RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 ZNF3P17036 446 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 TMBIM6P55061 237 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 ERVK-25P63136 954 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 RPL18Q07020 188 aaKnown RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 ALG10Q5BKT4 473 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 MEPCEQ7L2J0 689 aaKnown RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 HIST3H2AQ7L7L0 130 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 MAMDC2Q7Z304 686 aaPredicted RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 GID4Q8IVV7 300 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 CYB561A3Q8NBI2 242 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 OR4K17Q8NGC6 315 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 OR52E2Q8NGJ4 325 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 HIST1H2ACQ93077 130 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 C12orf43Q96C57 262 aaKnown RBP13.76□□□□□ -0.21
HDHD3-201ENST00000238379 YIPF6Q96EC8 236 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 PTGES2Q9H7Z7 377 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 ANKRD10Q9NXR5 420 aa13.76□□□□□ -0.21
HDHD3-201ENST00000238379 SHISA8B8ZZ34 492 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 M0R082 166 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 ZNF208O43345 1280 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 OR2T1O43869 369 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 AHSA1O95433 338 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 CD14P08571 375 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 APEHP13798 732 aaKnown RBP13.75□□□□□ -0.21
HDHD3-201ENST00000238379 GSTT1P30711 240 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 MAP2K6P52564 334 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 DBPQ10586 325 aaPredicted RBP13.75□□□□□ -0.21
HDHD3-201ENST00000238379 B3GNT6Q6ZMB0 384 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 FAM122BQ7Z309 247 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 ZNF227Q86WZ6 799 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 BEST3Q8N1M1 668 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 OR6S1Q8NH40 331 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 OR4K13Q8NH42 304 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 KIAA1143Q96AT1 154 aaPredicted RBP13.75□□□□□ -0.21
HDHD3-201ENST00000238379 SLC25A36Q96CQ1 311 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 OR5M11Q96RB7 305 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 DDOQ99489 341 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 KLHL1Q9NR64 748 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms