RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 RPS4Y2Q8TD47 263 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF721Q8TF20 911 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 ZNRF4Q8WWF5 429 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 PHYHIPQ92561 330 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 ST6GAL2Q96JF0 529 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 LAT2Q9GZY6 243 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 ADAM19Q9H013 955 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF221Q9UK13 617 aa14.77□□□□□ -0.05
UBE3D-201ENST00000237186 FAM25AB3EWG3 89 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 FAM25CB3EWG5 89 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 FAM25GB3EWG6 89 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 NUDT21O43809 227 aaKnown RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 GATBO75879 557 aaKnown RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 GLCEO94923 617 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 TXNDC12O95881 172 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 CD14P08571 375 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 PRKAR1AP10644 381 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 FOSL2P15408 326 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 RBMS1P29558 406 aaKnown RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 OR1D4P47884 311 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 PPM1FP49593 454 aaPredicted RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 RGS19P49795 217 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 HCCSP53701 268 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 KCNAB1Q14722 419 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 UBXN2BQ14CS0 331 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 SF3A2Q15428 464 aaKnown RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 TP53I3Q53FA7 332 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 FAM122BQ7Z309 247 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 PLXDC1Q8IUK5 500 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 ENKURQ8TC29 256 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 THAP4Q8WY91 577 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 NEK6Q9HC98 313 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 MMP25Q9NPA2 562 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 UCKL1Q9NWZ5 548 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 NCDNQ9UBB6 729 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 EXTL2Q9UBQ6 330 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 MALT1Q9UDY8 824 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 RASD1Q9Y272 281 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 CLCA3PQ9Y6N3 262 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 TDRD6O60522 2096 aaKnown RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 GON4LQ3T8J9 2241 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 TCRBV16S1A1N1A0A5B0 115 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 ANKRD61A6NGH8 418 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 TFECO14948 347 aaPredicted RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 TO15178 435 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 ASAH2BP0C7U1 165 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 ALAS2P22557 587 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 MST1P26927 711 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 HLA-DMAP28067 261 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 GDI2P50395 445 aaKnown RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 STARD6P59095 220 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 ERVK-25P63136 954 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 EGR4Q05215 589 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 QPRTQ15274 297 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 ATAD3CQ5T2N8 411 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 UNQ9370/PRO34162Q6UXP9 181 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 EXD3Q8N9H8 876 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 OR51L1Q8NGJ5 315 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 MOSPD2Q8NHP6 518 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 SNX33Q8WV41 574 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 DNASE2BQ8WZ79 361 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 TSLPQ969D9 159 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF486Q96H40 463 aaPredicted RBP14.76□□□□□ -0.05
UBE3D-201ENST00000237186 MOKQ9UQ07 419 aa14.76□□□□□ -0.05
UBE3D-201ENST00000237186 LYRM1O43325 122 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 PRKNO60260 465 aaPredicted RBP14.75□□□□□ -0.05
UBE3D-201ENST00000237186 GPRIN2O60269 458 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 SDC3O75056 442 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 ARL6IP5O75915 188 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 UCHL1P09936 223 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 RAB3BP20337 219 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 TALDO1P37837 337 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 AQP2P41181 271 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 SLC6A8P48029 635 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 OR1D5P58170 312 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 OR10A3P58181 314 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 RPS11P62280 158 aaKnown RBP eCLIP14.75□□□□□ -0.05
UBE3D-201ENST00000237186 CFHR1Q03591 330 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 EMC4Q5J8M3 183 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 ZNF684Q5T5D7 378 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 PLET1Q6UQ28 207 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 OR1L3Q8NH93 324 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.75□□□□□ -0.05
UBE3D-201ENST00000237186 SLC41A2Q96JW4 573 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 HSPA12BQ96MM6 686 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 OR8D2Q9GZM6 311 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 MARCH7Q9H992 704 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 NANSQ9NR45 359 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 N6AMT1Q9Y5N5 214 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 SPTBP11277 2137 aa14.75□□□□□ -0.05
UBE3D-201ENST00000237186 A0A1W2PQD3 144 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 EIF4EP06730 217 aaKnown RBP14.74□□□□□ -0.05
UBE3D-201ENST00000237186 UQCRC1P31930 480 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 NAA10P41227 235 aaPredicted RBP14.74□□□□□ -0.05
UBE3D-201ENST00000237186 CDKN2AP42771 156 aaKnown RBP14.74□□□□□ -0.05
UBE3D-201ENST00000237186 LTBQ06643 244 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 CEP78Q5JTW2 689 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 OVCH1Q7RTY7 1134 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 GATSQ8NAP1 163 aa14.74□□□□□ -0.05
UBE3D-201ENST00000237186 ZPLD1Q8TCW7 415 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms