RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 RPS4XP62701 263 aaKnown RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 H3F3AP84243 136 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 MFSD13AQ14CX5 517 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 SNCBQ16143 134 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 ANKDD1AQ495B1 522 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 KLHL17Q6TDP4 642 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 PARP8Q8N3A8 854 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 CISD2Q8N5K1 135 aaKnown RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 LRRC17Q8N6Y2 441 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 LSM14AQ8ND56 463 aaKnown RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 ATP6V1C2Q8NEY4 427 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 MAGEE2Q8TD90 523 aaPredicted RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 SNRNP40Q96DI7 357 aaKnown RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 WDYHV1Q96HA8 205 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 OR5B2Q96R09 309 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 SLX1AQ9BQ83 275 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 TSPAN10Q9H1Z9 355 aaPredicted RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 NANSQ9NR45 359 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 IL20Q9NYY1 176 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 REV1Q9UBZ9 1251 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 ZNF229Q9UJW7 825 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 NPIPA1Q9UND3 350 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 SIGLEC7Q9Y286 467 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 POFUT2Q9Y2G5 429 aa12.61□□□□□ -0.39
SEC61B-201ENST00000223641 PRRC2CQ9Y520 2896 aaKnown RBP12.61□□□□□ -0.39
SEC61B-201ENST00000223641 OR14I1A6ND48 311 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 EFCAB9A8MZ26 197 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 E9PQ18 207 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 H0YC42 278 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 DNPH1O43598 174 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 TFPIP10646 304 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 POU2F1P14859 743 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 DIO1P49895 249 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 TPD52P55327 224 aaPredicted RBP12.6□□□□□ -0.39
SEC61B-201ENST00000223641 FXYD6P3P58550 94 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 RAC3P60763 192 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 ARHGAP11AQ6P4F7 1023 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 RASSF6Q6ZTQ3 369 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 MEX3DQ86XN8 651 aaKnown RBP12.6□□□□□ -0.39
SEC61B-201ENST00000223641 CLDN22Q8N7P3 220 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 SCAIQ8N9R8 606 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 OR2V1Q8NHB1 315 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 GTPBP3Q969Y2 492 aaKnown RBP12.6□□□□□ -0.39
SEC61B-201ENST00000223641 RDH12Q96NR8 316 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 UCK2Q9BZX2 261 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 PRDM14Q9GZV8 571 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 ZNF556Q9HAH1 456 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 FANCFQ9NPI8 374 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 MRPL39Q9NYK5 338 aaKnown RBP12.6□□□□□ -0.39
SEC61B-201ENST00000223641 HIF3AQ9Y2N7 669 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 CORINQ9Y5Q5 1042 aa12.6□□□□□ -0.39
SEC61B-201ENST00000223641 SULT2B1O00204 365 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 TNFSF11O14788 317 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 SAGP10523 405 aaPredicted RBP12.59□□□□□ -0.39
SEC61B-201ENST00000223641 OSMP13725 252 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 IGFBP5P24593 272 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 GRPRP30550 384 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 UQCRC1P31930 480 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 VHLP40337 213 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 P2RY4P51582 365 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 AGFG1P52594 562 aaKnown RBP12.59□□□□□ -0.39
SEC61B-201ENST00000223641 CSNK2A1P68400 391 aaPredicted RBP12.59□□□□□ -0.39
SEC61B-201ENST00000223641 SLC35A1P78382 337 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 OR7A5Q15622 319 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 RFX4Q33E94 735 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 ZBED5Q49AG3 693 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 ZNF620Q6ZNG0 422 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 MAMDC2Q7Z304 686 aaPredicted RBP12.59□□□□□ -0.39
SEC61B-201ENST00000223641 FGD2Q7Z6J4 655 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 OAFQ86UD1 273 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 KIF18BQ86Y91 864 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 GHDCQ8N2G8 530 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 ADPRHL1Q8NDY3 354 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 OR5J2Q8NH18 312 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 SMPDL3BQ92485 455 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 SARAFQ96BY9 339 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 GABARAPL3Q9BY60 117 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 VCX3BQ9H321 246 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 EXO5Q9H790 373 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 PAPOLBQ9NRJ5 636 aaKnown RBP12.59□□□□□ -0.39
SEC61B-201ENST00000223641 KRT84Q9NSB2 600 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 PAQR5Q9NXK6 330 aaPredicted RBP12.59□□□□□ -0.39
SEC61B-201ENST00000223641 ALKBH4Q9NXW9 302 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 KIF17Q9P2E2 1029 aa12.59□□□□□ -0.39
SEC61B-201ENST00000223641 A0A1B0GTH9 108 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 UNC119BA6NIH7 251 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 M0R082 166 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 EIF1AYO14602 144 aaKnown RBP12.58□□□□□ -0.4
SEC61B-201ENST00000223641 ATXN7O15265 892 aaPredicted RBP12.58□□□□□ -0.4
SEC61B-201ENST00000223641 EIF1BO60739 113 aaKnown RBP12.58□□□□□ -0.4
SEC61B-201ENST00000223641 MITFO75030 526 aaPredicted RBP12.58□□□□□ -0.4
SEC61B-201ENST00000223641 RAD23AP54725 363 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 CARD18P57730 90 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 ESRRGP62508 458 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 ZP4Q12836 540 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 SGCBQ16585 318 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 PDSS1Q5T2R2 415 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 HBMQ6B0K9 141 aa12.58□□□□□ -0.4
SEC61B-201ENST00000223641 PAQR6Q6TCH4 344 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms