RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SH3GLB1Q9Y371 365 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 APCP25054 2843 aa11.26□□□□□ -0.61
LSM5-201ENST00000223084 SPG11Q96JI7 2443 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 IGKV3D-15A0A087WSY6 115 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 A0A087WUJ7 227 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 SH3D21A4FU49 640 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 ZNF724A8MTY0 619 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 C16orf97H3BN30 126 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 CXCR6O00574 342 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 GSTA4O15217 222 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 EIF1BO60739 113 aaKnown RBP11.25□□□□□ -0.61
LSM5-201ENST00000223084 IFNA14P01570 189 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 THY1P04216 161 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 PNMTP11086 282 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 EPXP11678 715 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 CBLP22681 906 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 PEX19P40855 299 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 OR1E2P47887 323 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 PDK3Q15120 406 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 TSC22D1Q15714 1073 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 GKAP1Q5VSY0 366 aaPredicted RBP11.25□□□□□ -0.61
LSM5-201ENST00000223084 FAM91A1Q658Y4 838 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 PAQR6Q6TCH4 344 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 STAC2Q6ZMT1 411 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 BEND4Q6ZU67 534 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 C22orf34Q6ZV56 151 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 GALNT5Q7Z7M9 940 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 STK32CQ86UX6 486 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 ANKS4BQ8N8V4 417 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 RASSF5Q8WWW0 418 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 SLC38A4Q969I6 547 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 TAAR8Q969N4 342 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 SLC47A1Q96FL8 570 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 TPD52L3Q96J77 140 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 WFIKKN1Q96NZ8 548 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 KCTD14Q9BQ13 255 aaPredicted RBP11.25□□□□□ -0.61
LSM5-201ENST00000223084 TACO1Q9BSH4 297 aaKnown RBP11.25□□□□□ -0.61
LSM5-201ENST00000223084 ALG2Q9H553 416 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 C12orf10Q9HB07 376 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 SLC24A3Q9HC58 644 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 MCCC2Q9HCC0 563 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 ADA2Q9NZK5 511 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 ABCD2Q9UBJ2 740 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 PRSS50Q9UI38 385 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 ALPK2Q86TB3 2170 aa11.25□□□□□ -0.61
LSM5-201ENST00000223084 ITPR3Q14573 2671 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 AQP7P3A6NL99 342 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 FTCDNL1E5RQL4 147 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 FMO6PO60774 539 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 LYPD3O95274 346 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 IGHV3-9P01782 118 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 NCK1P16333 377 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 OR3A2P47893 321 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 P2RY4P51582 365 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 SLC16A1P53985 500 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 SLC25A3Q00325 362 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 FOXD4Q12950 439 aaPredicted RBP11.24□□□□□ -0.61
LSM5-201ENST00000223084 SLC17A1Q14916 467 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 ZNF613Q6PF04 617 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 WDR88Q6ZMY6 472 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 DEF8Q6ZN54 512 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 TMEM200AQ86VY9 491 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 CXorf67Q86X51 503 aaPredicted RBP11.24□□□□□ -0.61
LSM5-201ENST00000223084 ZNF100Q8IYN0 542 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 FITM2Q8N6M3 262 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 RNF148Q8N7C7 305 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 CCDC197Q8NCU1 140 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 MFSD8Q8NHS3 518 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 ADAMTS16Q8TE57 1224 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 ZC3HAV1LQ96H79 300 aaKnown RBP11.24□□□□□ -0.61
LSM5-201ENST00000223084 EMC3Q9P0I2 261 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 SEC14L4Q9UDX3 406 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 BAG5Q9UL15 447 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 SLC7A7Q9UM01 511 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 SLC9A8Q9Y2E8 581 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 NOSIPQ9Y314 301 aaKnown RBP11.24□□□□□ -0.61
LSM5-201ENST00000223084 TESMINQ9Y4I5 508 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 FLVCR1Q9Y5Y0 555 aa11.24□□□□□ -0.61
LSM5-201ENST00000223084 POLQO75417 2590 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 TRAV36DV7A0A075B6V5 113 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 TRAPPC13A5PLN9 417 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 A6NNC1 897 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 ADAP00813 363 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 PCYT1AP49585 367 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 SELENOWP63302 87 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 LTBQ06643 244 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 DAZAP2Q15038 168 aaPredicted RBP11.23□□□□□ -0.61
LSM5-201ENST00000223084 TMEM225Q6GV28 225 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 LINC00114Q6XXX2 140 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 VTCN1Q7Z7D3 282 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 GPAT4Q86UL3 456 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 GABRG1Q8N1C3 465 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 KDM8Q8N371 416 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 ZIC4Q8N9L1 334 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 FAM156AQ8NDB6 213 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 LURAP1Q96LR2 239 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 DACH2Q96NX9 599 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 MED18Q9BUE0 208 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 SPAG4Q9NPE6 437 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 NDRG3Q9UGV2 375 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms