RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SULT1B1O43704 296 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 IFNA7P01567 189 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 PVRP15151 417 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 SPI1P17947 270 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 M6PRP20645 277 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 DNASE1P24855 282 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 RPL4P36578 427 aaKnown RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 LSSP48449 732 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 EPHA4P54764 986 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 PSMD4P55036 377 aaKnown RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 RPL6Q02878 288 aaKnown RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 SEZ6L2Q6UXD5 910 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 DGAT2L6Q6ZPD8 337 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 RFPL4BQ6ZWI9 263 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 LINGO2Q7L985 606 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 OR8H3Q8N146 312 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 DACT3Q96B18 629 aaPredicted RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 NXPE2Q96DL1 559 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 BMFQ96LC9 184 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 HSPA12BQ96MM6 686 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 DERL3Q96Q80 235 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 DDOQ99489 341 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 ORAI3Q9BRQ5 295 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 CAPN10Q9HC96 672 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 NANSQ9NR45 359 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 EIF3KQ9UBQ5 218 aaKnown RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 CA5BQ9Y2D0 317 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 ZNF281Q9Y2X9 895 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 ADAM18Q9Y3Q7 739 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 A0A087WUJ7 227 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 SNTA1Q13424 505 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 LGALSLQ3ZCW2 172 aaPredicted RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 GPR139Q6DWJ6 353 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 ZC3H14Q6PJT7 736 aaKnown RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 OR11G2Q8NGC1 345 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 VSTM2LQ96N03 204 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 SMAD5Q99717 465 aaKnown RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 ZNF436Q9C0F3 470 aaPredicted RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 SPRTNQ9H040 489 aaPredicted RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 CLEC4MQ9H2X3 399 aaPredicted RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 KLHL9Q9P2J3 617 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 COPS3Q9UNS2 423 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 ZNF337Q9Y3M9 751 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 PIN1P1O15428 100 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 SELENOFO60613 162 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 HOXB2P14652 356 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 PSMB1P20618 241 aaKnown RBP12.19□□□□□ -0.46
SRP54-201ENST00000216774 DPP4P27487 766 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 ZP1P60852 638 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 RPS4XP62701 263 aaKnown RBP12.19□□□□□ -0.46
SRP54-201ENST00000216774 MRPS10P82664 201 aaKnown RBP12.19□□□□□ -0.46
SRP54-201ENST00000216774 METTL11BQ5VVY1 283 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 SLC35F3Q8IY50 421 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 IZUMO1Q8IYV9 350 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 FAM71CQ8NEG0 241 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 BEST4Q8NFU0 473 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 OR4N2Q8NGD1 307 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 SLC25A38Q96DW6 304 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 GPX7Q96SL4 187 aaPredicted RBP12.19□□□□□ -0.46
SRP54-201ENST00000216774 NMNAT3Q96T66 252 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 GFI1Q99684 422 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 CCDC3Q9BQI4 270 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 G6PC3Q9BUM1 346 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 SLC19A3Q9BZV2 496 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 HRASLSQ9HDD0 168 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 POT1Q9NUX5 634 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 ANKRD10Q9NXR5 420 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 GLTPQ9NZD2 209 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 RCE1Q9Y256 329 aa12.19□□□□□ -0.46
SRP54-201ENST00000216774 A0A1B0GUH1 482 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 OR6C68A6NDL8 312 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 CA3P07451 260 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 SYPP08247 313 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 ADRB1P08588 477 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 COL9A1P20849 921 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 HNRNPA2B1P22626 353 aaKnown RBP12.18□□□□□ -0.46
SRP54-201ENST00000216774 PSMB10P40306 273 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 ZNF81P51508 661 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 VSX2P58304 361 aaPredicted RBP12.18□□□□□ -0.46
SRP54-201ENST00000216774 PRPS1P60891 318 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 FAM53BQ14153 422 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 ALG11Q2TAA5 492 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 TOR2AQ5JU69 321 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 SLC6A19Q695T7 634 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 ZNRF4Q8WWF5 429 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 DHRS9Q9BPW9 319 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 C2orf42Q9NWW7 574 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 TRANK1O15050 2925 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 GNB5O14775 395 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 RDH16O75452 317 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 KRT33AO76009 404 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 OR7A10O76100 309 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 GLCEO94923 617 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 HPXP02790 462 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 RAB40ALP0C0E4 278 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 CALCBP10092 127 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 CLLU1Q5K131 121 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms