RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 AAED1Q7RTV5 226 aa17.17■□□□□ 0.34
SYNGR1-201ENST00000216155 TRIML2Q8N7C3 387 aa17.17■□□□□ 0.34
SYNGR1-201ENST00000216155 POMGNT2Q8NAT1 580 aa17.17■□□□□ 0.34
SYNGR1-201ENST00000216155 TMEM109Q9BVC6 243 aa17.17■□□□□ 0.34
SYNGR1-201ENST00000216155 SHARPINQ9H0F6 387 aa17.17■□□□□ 0.34
SYNGR1-201ENST00000216155 AIG1Q9NVV5 245 aa17.17■□□□□ 0.34
SYNGR1-201ENST00000216155 RLIMQ9NVW2 624 aa17.17■□□□□ 0.34
SYNGR1-201ENST00000216155 FKBP7Q9Y680 259 aa17.17■□□□□ 0.34
SYNGR1-201ENST00000216155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 KLF11O14901 512 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 LMX1BO60663 402 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 SNUPNO95149 360 aaKnown RBP17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 GSNP06396 782 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 PGRP06401 933 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 GPIP06744 558 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 DBIP07108 87 aaKnown RBP17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 NR2F1P10589 423 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 BGNP21810 368 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 PDLIM4P50479 330 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 ANXA11P50995 505 aaKnown RBP17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 P2RY4P51582 365 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 GGTLC2Q14390 218 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 GPAT4Q86UL3 456 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 ALKBH3Q96Q83 286 aaPredicted RBP17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 MTHFD2LQ9H903 347 aaPredicted RBP17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 OBP2BQ9NPH6 170 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 DSPPQ9NZW4 1301 aa17.16■□□□□ 0.34
SYNGR1-201ENST00000216155 CDHR4A6H8M9 788 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 FRS3O43559 492 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 GKN3PP0CG01 181 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 NR4A2P43354 598 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 GZMKP49863 264 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 SNRPD2P62316 118 aaKnown RBP17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 LGALS3BPQ08380 585 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 BNIP2Q12982 314 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 GSTA3Q16772 222 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 KRT71Q3SY84 523 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 TBRG1Q3YBR2 411 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 ZNF836Q6ZNA1 936 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 ZNF621Q6ZSS3 439 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 VRK2Q86Y07 508 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 PEX5LQ8IYB4 626 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 ZNF440Q8IYI8 595 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 KIRREL3Q8IZU9 778 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 OR1K1Q8NGR3 316 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 AURKBQ96GD4 344 aaPredicted RBP17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 SLC38A2Q96QD8 506 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 OR52E6Q96RD3 313 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 PIMREGQ9BSJ6 248 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 PRR14Q9BWN1 585 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 PIF1Q9H611 641 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 CHODLQ9H9P2 273 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 SSU72Q9NP77 194 aaKnown RBP17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 CA10Q9NS85 328 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 PNPOQ9NVS9 261 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 ADPRHL2Q9NX46 363 aa17.15■□□□□ 0.34
SYNGR1-201ENST00000216155 SLC35F4A4IF30 521 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 NDUFS8O00217 210 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 SDHDO14521 159 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 TM9SF1O15321 606 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 LGI1O95970 557 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 CXCR1P25024 350 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 ACAA2P42765 397 aaKnown RBP17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 SELENOPP49908 381 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 LIN52Q52LA3 116 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 IL17RELQ6ZVW7 336 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 LINGO2Q7L985 606 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 ABHD12BQ7Z5M8 362 aaPredicted RBP17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 CADM2Q8N3J6 435 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 MSI2Q96DH6 328 aaKnown RBP17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 TRIM44Q96DX7 344 aaPredicted RBP17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 KATNB1Q9BVA0 655 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 SLC6A13Q9NSD5 602 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 KCNS2Q9ULS6 477 aa17.14■□□□□ 0.33
SYNGR1-201ENST00000216155 IGHV4-61A0A0C4DH41 118 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 ZNF587BE7ETH6 402 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 SRD5A1P18405 259 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 THBS2P35442 1172 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 MVDP53602 400 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 FAM166AQ6J272 317 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 CREB3L2Q70SY1 520 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 ANKS4BQ8N8V4 417 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 OR52P1PQ8NH57 321 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 NELFAQ9H3P2 528 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 TMEM45AQ9NWC5 275 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 CRNNQ9UBG3 495 aaPredicted RBP17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 P2RX2Q9UBL9 471 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 ZNF443Q9Y2A4 671 aaPredicted RBP17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 GPR45Q9Y5Y3 372 aa17.13■□□□□ 0.33
SYNGR1-201ENST00000216155 A8MVM7 634 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 RGS16O15492 202 aaPredicted RBP17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 KRT33AO76009 404 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 SERPINF1P36955 418 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 TUBA1BP68363 451 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 TUBA4AP68366 448 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 SRSF2Q01130 221 aaKnown RBP17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 LRRC74AQ0VAA2 488 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 BST1Q10588 318 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 STX3Q13277 289 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 MPP2Q14168 576 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms