RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 NKAIN4Q8IVV8 208 aa13.83□□□□□ -0.19
SRRD-201ENST00000215917 SMIM3Q9BZL3 60 aa13.83□□□□□ -0.19
SRRD-201ENST00000215917 FCMRO60667 390 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 GLAP06280 429 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 CMPK1P30085 196 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 HSD17B2P37059 387 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 PRKXP51817 358 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 ILF3Q12906 894 aaKnown RBP eCLIP13.83□□□□□ -0.2
SRRD-201ENST00000215917 YIF1BQ5BJH7 314 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 SHISA5Q8N114 240 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 GTPBP8Q8N3Z3 284 aaPredicted RBP13.83□□□□□ -0.2
SRRD-201ENST00000215917 OR5M3Q8NGP4 307 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 OR13C2Q8NGS9 318 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 SMPDL3BQ92485 455 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 RERGQ96A58 199 aaPredicted RBP13.83□□□□□ -0.2
SRRD-201ENST00000215917 SLC41A3Q96GZ6 507 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 ORAI3Q9BRQ5 295 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 AICDAQ9GZX7 198 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 NPAP1Q9NZP6 1156 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 FTSJ1Q9UET6 329 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 UNC13CQ8NB66 2214 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 A0A1W2PQF6 199 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 PLA2G10O15496 165 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 FBXO24O75426 580 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 SLC25A12O75746 678 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 DCNP07585 359 aaKnown RBP13.83□□□□□ -0.2
SRRD-201ENST00000215917 TFPIP10646 304 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 ATP5A1P25705 553 aaKnown RBP13.83□□□□□ -0.2
SRRD-201ENST00000215917 GABRA5P31644 462 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 GABRA3P34903 492 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 RAB40BQ12829 278 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 RPE65Q16518 533 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 IDO2Q6ZQW0 420 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 LRRC28Q86X40 367 aaPredicted RBP13.83□□□□□ -0.2
SRRD-201ENST00000215917 SYNPRQ8TBG9 265 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 MS4A6EQ96DS6 147 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 LRRC46Q96FV0 321 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 PLA2G12AQ9BZM1 189 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 OR52D1Q9H346 318 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 ACOXLQ9NUZ1 547 aa13.83□□□□□ -0.2
SRRD-201ENST00000215917 UNC119BA6NIH7 251 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 ZNF888P0CJ79 500 aaPredicted RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 CCKBRP32239 447 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 GRK6P43250 576 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 PCBP4P57723 403 aaKnown RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 DOC2BQ14184 412 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 RAB30Q15771 203 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 SLC25A35Q3KQZ1 300 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 HEPHL1Q6MZM0 1159 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 TMEM17Q86X19 198 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 MS4A15Q8N5U1 240 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 CLDN22Q8N7P3 220 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 MAFIPQ8WZ33 124 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 GPA33Q99795 319 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 CRB3Q9BUF7 120 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 TRAF4Q9BUZ4 470 aaPredicted RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 ZNF700Q9H0M5 742 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 A4GALTQ9NPC4 353 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 KLHL9Q9P2J3 617 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 APOBEC3BQ9UH17 382 aaKnown RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 TTLL8A6PVC2 850 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 LEUTXA8MZ59 168 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 UBXN7O94888 489 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 NAT2P11245 290 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 ELOAQ14241 798 aaKnown RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 GK2Q14410 553 aaPredicted RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 TSC22D1Q15714 1073 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 OCLNQ16625 522 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 TMEM163Q8TC26 289 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 TMEM255BQ8WV15 326 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 STARD5Q9NSY2 213 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 GMDSO60547 372 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 PEX14O75381 377 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 CLEC3AO75596 197 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 TXNDC12O95881 172 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 RAD52P43351 418 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 PER3P56645 1201 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 SNRPNP63162 240 aaKnown RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 EIF2B1Q14232 305 aaKnown RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 ABHD17CQ6PCB6 329 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 PEG10Q86TG7 708 aaKnown RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 SFTPA2Q8IWL1 248 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 TMEM99Q8N816 258 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 TMEM168Q9H0V1 697 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 S1PR5Q9H228 398 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 KLK11Q9UBX7 282 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 SCP2D1Q9UJQ7 156 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 GPR55Q9Y2T6 319 aaPredicted RBP13.82□□□□□ -0.2
SRRD-201ENST00000215917 PCDHGB7Q9Y5F8 929 aa13.82□□□□□ -0.2
SRRD-201ENST00000215917 SCO2O43819 266 aa13.81□□□□□ -0.2
SRRD-201ENST00000215917 MRPS14O60783 128 aaKnown RBP13.81□□□□□ -0.2
SRRD-201ENST00000215917 SDC3O75056 442 aa13.81□□□□□ -0.2
SRRD-201ENST00000215917 PSMB1P20618 241 aaKnown RBP13.81□□□□□ -0.2
SRRD-201ENST00000215917 EVX1P49640 407 aa13.81□□□□□ -0.2
SRRD-201ENST00000215917 CHAF1BQ13112 559 aa13.81□□□□□ -0.2
SRRD-201ENST00000215917 ILKQ13418 452 aa13.81□□□□□ -0.2
SRRD-201ENST00000215917 IGSF11Q5DX21 431 aa13.81□□□□□ -0.2
SRRD-201ENST00000215917 DMRTC1Q5HYR2 192 aa13.81□□□□□ -0.2
SRRD-201ENST00000215917 HLA-DQA1Q5Y7H0 255 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms