RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 OR51D1Q8NGF3 324 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 OR2T11Q8NH01 316 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 SGK3Q96BR1 496 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 PSD2Q9BQI7 771 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 RPS10P5Q9NQ39 176 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 LUZP4Q9P127 313 aa12.61□□□□□ -0.39
SF3A1-201ENST00000215793 CCDC88AQ3V6T2 1871 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SLC22A23A1A5C7 686 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF593O00488 134 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TOR1AO14656 332 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SUSD5O60279 629 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 PEX14O75381 377 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 CHRNB1P11230 501 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TAS2R30P59541 319 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 NKX6-1P78426 367 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 EEF1A2Q05639 463 aaKnown RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 Q6ZPB1 254 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 FAM57BQ71RH2 274 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 DNAJC5GQ8N7S2 189 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 CNEP1R1Q8N9A8 125 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TMEM102Q8N9M5 508 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 OR6T1Q8NGN1 323 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SMAP2Q8WU79 429 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 MIB2Q96AX9 1013 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 NRIP3Q9NQ35 241 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 MYH15Q9Y2K3 1946 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TMEM72A0PK05 275 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 PSMB1P20618 241 aaKnown RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SLC5A2P31639 672 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 EVI2BP34910 448 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 S100A7AQ86SG5 101 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 ADIPOR2Q86V24 386 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 PHYHIPQ92561 330 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 FRZBQ92765 325 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TAAR8Q969N4 342 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SLC46A1Q96NT5 459 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 AMDHD1Q96NU7 426 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TMEM38AQ9H6F2 299 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 A4GALTQ9NPC4 353 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 OBP2BQ9NPH6 170 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 DIMT1Q9UNQ2 313 aaKnown RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 IGLV3-10A0A075B6K4 115 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 C2orf72A6NCS6 295 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SLCO2B1O94956 709 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 HTR5AP47898 357 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 C17orf67Q0P5P2 114 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 Q499Y3 187 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 FAM111BQ6SJ93 734 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 FRMD1Q8N878 549 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 ZNF419Q96HQ0 510 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 LCORQ96JN0 433 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TNFRSF13CQ96RJ3 184 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 NMNAT2Q9BZQ4 307 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 CXorf36Q9H7Y0 433 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 MMACHCQ9Y4U1 282 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TRAV36DV7A0A075B6V5 113 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 RNF212BA8MTL3 300 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 HIDE1A8MVS5 230 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SURF4O15260 269 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 HCRTR1O43613 425 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 OR7C1O76099 320 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SLC35E2P0CK97 266 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 MSR1P21757 451 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 POLR2IP36954 125 aaKnown RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 MTNR1BP49286 362 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 RPS18P62269 152 aaKnown RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 RPS27AP62979 156 aaKnown RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 UBA52P62987 128 aaKnown RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SLC35A1P78382 337 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 HSF5Q4G112 596 aaPredicted RBP12.6□□□□□ -0.39
SF3A1-201ENST00000215793 SLC22A25Q6T423 547 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 NLRP8Q86W28 1048 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 DUSP19Q8WTR2 217 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 GAB3Q8WWW8 586 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 GHSRQ92847 366 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 TMEM59Q9BXS4 323 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 MYOTQ9UBF9 498 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 HCSTQ9UBK5 93 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 PISDQ9UG56 409 aa12.6□□□□□ -0.39
SF3A1-201ENST00000215793 A0A087WUU8 490 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 KLKB1P03952 638 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 HOXB5P09067 269 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 LIPCP11150 499 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 GPX2P18283 190 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 CHATP28329 748 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 CHRNB4P30926 498 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 SEMA3BQ13214 749 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 KLHDC9Q8NEP7 349 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 KCNG3Q8TAE7 436 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 RPL3LQ92901 407 aaKnown RBP12.59□□□□□ -0.39
SF3A1-201ENST00000215793 TMEM106AQ96A25 262 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 ISL2Q96A47 359 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 SNX18Q96RF0 628 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 LIN7BQ9HAP6 207 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 NOX4Q9NPH5 578 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 TCRBV5S1A1TA0A578 114 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 TMEM82A0PJX8 343 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 SLC16A6O15403 523 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 CBX7O95931 251 aa12.59□□□□□ -0.39
SF3A1-201ENST00000215793 CATR1Q13166 79 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms