RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PPIL3Q9H2H8 161 aaKnown RBP11.11□□□□□ -0.63
CHPF2-201ENST00000035307 CHRDQ9H2X0 955 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 PLEKHA6Q9Y2H5 1048 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 TRAV18A0A075B6X5 111 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 TRBV5-3A0A0A0MS03 114 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 C5orf51A6NDU8 294 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 SLC16A7O60669 478 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
CHPF2-201ENST00000035307 SYPP08247 313 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 HCKP08631 526 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 TGFBR2P37173 567 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 PITPNAQ00169 270 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 FOXK2Q01167 660 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 IFI44Q8TCB0 444 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 GPBAR1Q8TDU6 330 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 GUCD1Q96NT3 240 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 OR1F2PQ96R84 312 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 GPATCH2Q9NW75 528 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 SLC39A1Q9NY26 324 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 CBLCQ9ULV8 474 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF318Q5VUA4 2279 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 COL6A3P12111 3177 aa11.11□□□□□ -0.63
CHPF2-201ENST00000035307 PCNX2A6NKB5 2137 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 MASP2O00187 686 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF20P17024 532 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 SRP9P49458 86 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 AP3S2P59780 193 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 CCDC71Q8IV32 467 aaPredicted RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 LSM14AQ8ND56 463 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 OR5M1Q8NGP8 315 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 ORAI3Q9BRQ5 295 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 THAP7Q9BT49 309 aaPredicted RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 ISG20L2Q9H9L3 353 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 FBXL4Q9UKA2 621 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 SATB2Q9UPW6 733 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 TSPAN4O14817 238 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 GALR3O60755 368 aaPredicted RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 ITGA5P08648 1049 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 TRHRP34981 398 aaPredicted RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 RORAP35398 523 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 HTR2BP41595 481 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 SNRPNP63162 240 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 SF3B4Q15427 424 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 AGAP6Q5VW22 663 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 GDPD3Q7L5L3 318 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 TANKQ92844 425 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 AGAP4Q96P64 663 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 SLC38A1Q9H2H9 487 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 CHST2Q9Y4C5 530 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 SNRNP200O75643 2136 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 TRIM3O75382 744 aaPredicted RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 DNASE1P24855 282 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 OR10A3P58181 314 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 TRA2BP62995 288 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 LAIR1Q6GTX8 287 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 DHRS13Q6UX07 377 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 MED25Q71SY5 747 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 OR2T35Q8NGX2 323 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 CEP76Q8TAP6 659 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF486Q96H40 463 aaPredicted RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 WFDC6Q9BQY6 131 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 PIGUQ9H490 435 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 ADAM29Q9UKF5 820 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 NOP16Q9Y3C1 178 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 RBM7Q9Y580 266 aaKnown RBP11.1□□□□□ -0.63
CHPF2-201ENST00000035307 SCN8AQ9UQD0 1980 aa11.1□□□□□ -0.63
CHPF2-201ENST00000035307 A0A0G2JMP0 313 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 A0A0X1KG70 313 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SELENOFO60613 162 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 CT62P0C5K7 136 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 CASP3P42574 277 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 PTH2RP49190 550 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 NXPH1P58417 271 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 TAS2R43P59537 309 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF322Q6U7Q0 402 aaPredicted RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 MBOAT2Q6ZWT7 520 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 FCRLAQ7L513 359 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 UBALD2Q8IYN6 164 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 RDH10Q8IZV5 341 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 OR4M2Q8NGB6 313 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SETD6Q8TBK2 473 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 DUSP19Q8WTR2 217 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 AKAP1Q92667 903 aaKnown RBP eCLIP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 YIPF6Q96EC8 236 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 CCDC32Q9BV29 185 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 BTBD2Q9BX70 525 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 GABARAPL3Q9BY60 117 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SYT4Q9H2B2 425 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 GALNT9Q9HCQ5 603 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SDHAF3Q9NRP4 125 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 POMT2Q9UKY4 750 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 EXO1Q9UQ84 846 aaKnown RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ASB4Q9Y574 426 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 KLK4Q9Y5K2 254 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 UBL4AP11441 157 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF24P17028 368 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 MAGEB1P43366 347 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SNU13P55769 128 aaKnown RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 PSMA6P60900 246 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms