RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 HIRAP54198 1017 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-222ENST00000641587 ZNF408Q9H9D4 720 aa13.15□□□□□ -0.3
PHGDH-222ENST00000641587 ZNRF3Q9ULT6 936 aa13.15□□□□□ -0.3
PHGDH-222ENST00000641587 COL4A1P02462 1669 aa13.15□□□□□ -0.31
PHGDH-222ENST00000641587 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
PHGDH-222ENST00000641587 CCDC85CA6NKD9 419 aa13.14□□□□□ -0.31
PHGDH-222ENST00000641587 YDJCA8MPS7 323 aa13.14□□□□□ -0.31
PHGDH-222ENST00000641587 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
PHGDH-222ENST00000641587 RALBP1Q15311 655 aa13.14□□□□□ -0.31
PHGDH-222ENST00000641587 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
PHGDH-222ENST00000641587 DLK2Q6UY11 383 aa13.14□□□□□ -0.31
PHGDH-222ENST00000641587 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-222ENST00000641587 SAPCD2Q86UD0 394 aa13.14□□□□□ -0.31
PHGDH-222ENST00000641587 BEGAINQ9BUH8 593 aa13.14□□□□□ -0.31
PHGDH-222ENST00000641587 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-222ENST00000641587 KIAA2012Q0VF49 1180 aa13.13□□□□□ -0.31
PHGDH-222ENST00000641587 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
PHGDH-222ENST00000641587 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
PHGDH-222ENST00000641587 NLRP10Q86W26 655 aa13.13□□□□□ -0.31
PHGDH-222ENST00000641587 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
PHGDH-222ENST00000641587 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-222ENST00000641587 LRRC37AA6NMS7 1700 aa13.13□□□□□ -0.31
PHGDH-222ENST00000641587 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
PHGDH-222ENST00000641587 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
PHGDH-222ENST00000641587 MPNDQ8N594 471 aa13.12□□□□□ -0.31
PHGDH-222ENST00000641587 SUPT20HQ8NEM7 779 aa13.12□□□□□ -0.31
PHGDH-222ENST00000641587 ZIC5Q96T25 663 aa13.12□□□□□ -0.31
PHGDH-222ENST00000641587 BCL2L13Q9BXK5 485 aa13.12□□□□□ -0.31
PHGDH-222ENST00000641587 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-222ENST00000641587 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
PHGDH-222ENST00000641587 MAP2K2P36507 400 aa13.11□□□□□ -0.31
PHGDH-222ENST00000641587 RIPK4P57078 832 aa13.11□□□□□ -0.31
PHGDH-222ENST00000641587 GRAPQ13588 217 aa13.11□□□□□ -0.31
PHGDH-222ENST00000641587 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
PHGDH-222ENST00000641587 GRAPLQ8TC17 118 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-222ENST00000641587 VPS33BQ9H267 617 aa13.11□□□□□ -0.31
PHGDH-222ENST00000641587 PGAP2Q9UHJ9 254 aa13.11□□□□□ -0.31
PHGDH-222ENST00000641587 TRMT112Q9UI30 125 aaKnown RBP13.11□□□□□ -0.31
PHGDH-222ENST00000641587 BBOX1O75936 387 aa13.1□□□□□ -0.31
PHGDH-222ENST00000641587 EGFRP00533 1210 aa13.1□□□□□ -0.31
PHGDH-222ENST00000641587 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
PHGDH-222ENST00000641587 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
PHGDH-222ENST00000641587 MCOLN1Q9GZU1 580 aa13.1□□□□□ -0.31
PHGDH-222ENST00000641587 CNOT7Q9UIV1 285 aaKnown RBP13.1□□□□□ -0.31
PHGDH-222ENST00000641587 SH3TC1Q8TE82 1336 aa13.1□□□□□ -0.31
PHGDH-222ENST00000641587 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
PHGDH-222ENST00000641587 SLC34A2O95436 690 aa13.09□□□□□ -0.31
PHGDH-222ENST00000641587 TCIRG1Q13488 830 aa13.09□□□□□ -0.31
PHGDH-222ENST00000641587 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
PHGDH-222ENST00000641587 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
PHGDH-222ENST00000641587 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
PHGDH-222ENST00000641587 DBNDD1Q9H9R9 158 aa13.09□□□□□ -0.31
PHGDH-222ENST00000641587 CDHR2Q9BYE9 1310 aa13.09□□□□□ -0.31
PHGDH-222ENST00000641587 PSMD14O00487 310 aa13.08□□□□□ -0.32
PHGDH-222ENST00000641587 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
PHGDH-222ENST00000641587 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-222ENST00000641587 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-222ENST00000641587 TNIP1Q15025 636 aa13.08□□□□□ -0.32
PHGDH-222ENST00000641587 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
PHGDH-222ENST00000641587 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
PHGDH-222ENST00000641587 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
PHGDH-222ENST00000641587 SCN9AQ15858 1988 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 ADM5C9JUS6 153 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 HUNKP57058 714 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 TBC1D10BQ4KMP7 808 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-222ENST00000641587 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-222ENST00000641587 CDC37L1Q7L3B6 337 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
PHGDH-222ENST00000641587 HHIPL1Q96JK4 782 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
PHGDH-222ENST00000641587 KCNQ5Q9NR82 932 aa13.07□□□□□ -0.32
PHGDH-222ENST00000641587 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 H7C1D1 291 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 RGS19P49795 217 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 DGKZQ13574 1117 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 NSFL1CQ9UNZ2 370 aaKnown RBP13.06□□□□□ -0.32
PHGDH-222ENST00000641587 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
PHGDH-222ENST00000641587 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
PHGDH-222ENST00000641587 TNRC18O15417 2968 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-222ENST00000641587 CA12O43570 354 aa13.05□□□□□ -0.32
PHGDH-222ENST00000641587 GPSM2P81274 684 aa13.05□□□□□ -0.32
PHGDH-222ENST00000641587 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
PHGDH-222ENST00000641587 WASHC4Q2M389 1173 aa13.05□□□□□ -0.32
PHGDH-222ENST00000641587 RBM26Q5T8P6 1007 aaKnown RBP13.05□□□□□ -0.32
PHGDH-222ENST00000641587 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
PHGDH-222ENST00000641587 ASTN2O75129 1339 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-222ENST00000641587 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-222ENST00000641587 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
PHGDH-222ENST00000641587 ECE2O60344 883 aa13.04□□□□□ -0.32
PHGDH-222ENST00000641587 NOGQ13253 232 aa13.04□□□□□ -0.32
PHGDH-222ENST00000641587 KRT26Q7Z3Y9 468 aa13.04□□□□□ -0.32
PHGDH-222ENST00000641587 ISCA1Q9BUE6 129 aa13.04□□□□□ -0.32
PHGDH-222ENST00000641587 CHL1O00533 1208 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms