RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 NMRK2Q9NPI5 230 aa21.07■□□□□ 0.96
RGPD1-205ENST00000641339 CDHR2Q9BYE9 1310 aa21.06■□□□□ 0.96
RGPD1-205ENST00000641339 ZC3H4Q9UPT8 1303 aaKnown RBP21.06■□□□□ 0.96
RGPD1-205ENST00000641339 SP8Q8IXZ3 490 aa21.06■□□□□ 0.96
RGPD1-205ENST00000641339 ZNF277Q9NRM2 450 aaPredicted RBP21.06■□□□□ 0.96
RGPD1-205ENST00000641339 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
RGPD1-205ENST00000641339 CASP7P55210 303 aa21.05■□□□□ 0.96
RGPD1-205ENST00000641339 GRIPAP1Q4V328 841 aa21.05■□□□□ 0.96
RGPD1-205ENST00000641339 CELF1Q92879 486 aaKnown RBP21.05■□□□□ 0.96
RGPD1-205ENST00000641339 CACNA1FO60840 1977 aa21.05■□□□□ 0.96
RGPD1-205ENST00000641339 HSP90B1P14625 803 aaKnown RBP21.04■□□□□ 0.96
RGPD1-205ENST00000641339 HSPA6P17066 643 aa21.04■□□□□ 0.96
RGPD1-205ENST00000641339 COL4A1P02462 1669 aa21.03■□□□□ 0.96
RGPD1-205ENST00000641339 GLTPD2A6NH11 291 aa21.03■□□□□ 0.96
RGPD1-205ENST00000641339 HNRNPUQ00839 825 aaKnown RBP eCLIP21.03■□□□□ 0.96
RGPD1-205ENST00000641339 ALDH1L2Q3SY69 923 aa21.03■□□□□ 0.96
RGPD1-205ENST00000641339 SEC31BQ9NQW1 1179 aa21.03■□□□□ 0.96
RGPD1-205ENST00000641339 CT47B1P0C2W7 299 aaPredicted RBP21.02■□□□□ 0.96
RGPD1-205ENST00000641339 IARSP41252 1262 aaKnown RBP21.02■□□□□ 0.96
RGPD1-205ENST00000641339 UBE3BQ7Z3V4 1068 aa21.02■□□□□ 0.96
RGPD1-205ENST00000641339 TTLL11Q8NHH1 800 aa21.02■□□□□ 0.96
RGPD1-205ENST00000641339 BCL2L13Q9BXK5 485 aa21.02■□□□□ 0.96
RGPD1-205ENST00000641339 RPS8P62241 208 aaKnown RBP21.01■□□□□ 0.95
RGPD1-205ENST00000641339 CCDC152Q4G0S7 254 aa21.01■□□□□ 0.95
RGPD1-205ENST00000641339 TMC4Q7Z404 712 aa21.01■□□□□ 0.95
RGPD1-205ENST00000641339 RTFDC1Q9BY42 306 aaPredicted RBP21.01■□□□□ 0.95
RGPD1-205ENST00000641339 CTSWP56202 376 aa21■□□□□ 0.95
RGPD1-205ENST00000641339 CCDC85AQ96PX6 553 aaPredicted RBP21■□□□□ 0.95
RGPD1-205ENST00000641339 PLA2G12BQ9BX93 195 aa21■□□□□ 0.95
RGPD1-205ENST00000641339 KDM2BQ8NHM5 1336 aa21■□□□□ 0.95
RGPD1-205ENST00000641339 TAF1P21675 1872 aa20.99■□□□□ 0.95
RGPD1-205ENST00000641339 TMX4Q9H1E5 349 aaPredicted RBP20.99■□□□□ 0.95
RGPD1-205ENST00000641339 RRAGCQ9HB90 399 aa20.99■□□□□ 0.95
RGPD1-205ENST00000641339 PTPRCP08575 1304 aa20.99■□□□□ 0.95
RGPD1-205ENST00000641339 POTECB2RU33 542 aa20.98■□□□□ 0.95
RGPD1-205ENST00000641339 FZD9O00144 591 aa20.98■□□□□ 0.95
RGPD1-205ENST00000641339 SLC4A10Q6U841 1118 aa20.98■□□□□ 0.95
RGPD1-205ENST00000641339 MPNDQ8N594 471 aa20.98■□□□□ 0.95
RGPD1-205ENST00000641339 COL4A5P29400 1685 aa20.97■□□□□ 0.95
RGPD1-205ENST00000641339 ALDH1L1O75891 902 aa20.97■□□□□ 0.95
RGPD1-205ENST00000641339 CSF1RP07333 972 aa20.97■□□□□ 0.95
RGPD1-205ENST00000641339 BRPF1P55201 1214 aaPredicted RBP20.97■□□□□ 0.95
RGPD1-205ENST00000641339 DPY19L2Q6NUT2 758 aa20.97■□□□□ 0.95
RGPD1-205ENST00000641339 DPP8Q6V1X1 898 aaPredicted RBP20.97■□□□□ 0.95
RGPD1-205ENST00000641339 VPS33BQ9H267 617 aa20.97■□□□□ 0.95
RGPD1-205ENST00000641339 GREM2Q9H772 168 aa20.97■□□□□ 0.95
RGPD1-205ENST00000641339 SMC4Q9NTJ3 1288 aa20.97■□□□□ 0.95
RGPD1-205ENST00000641339 DICER1Q9UPY3 1922 aaKnown RBP20.96■□□□□ 0.95
RGPD1-205ENST00000641339 TIAM2Q8IVF5 1701 aa20.96■□□□□ 0.95
RGPD1-205ENST00000641339 TOMM70O94826 608 aa20.96■□□□□ 0.95
RGPD1-205ENST00000641339 DDNO94850 711 aaPredicted RBP20.96■□□□□ 0.95
RGPD1-205ENST00000641339 RARSP54136 660 aaKnown RBP20.96■□□□□ 0.95
RGPD1-205ENST00000641339 SRCIN1Q9C0H9 1055 aa20.96■□□□□ 0.95
RGPD1-205ENST00000641339 GRM8O00222 908 aa20.95■□□□□ 0.94
RGPD1-205ENST00000641339 GPSM2P81274 684 aa20.95■□□□□ 0.94
RGPD1-205ENST00000641339 FOXO4P98177 505 aa20.95■□□□□ 0.94
RGPD1-205ENST00000641339 ZNF541Q9H0D2 1346 aa20.95■□□□□ 0.94
RGPD1-205ENST00000641339 RTL9Q8NET4 1388 aa20.95■□□□□ 0.94
RGPD1-205ENST00000641339 AOC3Q16853 763 aa20.94■□□□□ 0.94
RGPD1-205ENST00000641339 LARGE2Q8N3Y3 721 aa20.94■□□□□ 0.94
RGPD1-205ENST00000641339 SUPT20HQ8NEM7 779 aa20.94■□□□□ 0.94
RGPD1-205ENST00000641339 POLLQ9UGP5 575 aa20.94■□□□□ 0.94
RGPD1-205ENST00000641339 NSFL1CQ9UNZ2 370 aaKnown RBP20.94■□□□□ 0.94
RGPD1-205ENST00000641339 EPHA10Q5JZY3 1008 aa20.93■□□□□ 0.94
RGPD1-205ENST00000641339 ANKRD18AQ8IVF6 992 aa20.93■□□□□ 0.94
RGPD1-205ENST00000641339 C16orf71Q8IYS4 520 aaPredicted RBP20.93■□□□□ 0.94
RGPD1-205ENST00000641339 JDP2Q8WYK2 163 aa20.93■□□□□ 0.94
RGPD1-205ENST00000641339 NOB1Q9ULX3 412 aaKnown RBP20.93■□□□□ 0.94
RGPD1-205ENST00000641339 LRRC37AA6NMS7 1700 aa20.92■□□□□ 0.94
RGPD1-205ENST00000641339 PPIP5K2O43314 1243 aa20.92■□□□□ 0.94
RGPD1-205ENST00000641339 VEGFAP15692 232 aaPredicted RBP20.92■□□□□ 0.94
RGPD1-205ENST00000641339 KIAA2012Q0VF49 1180 aa20.92■□□□□ 0.94
RGPD1-205ENST00000641339 PODXL2Q9NZ53 605 aa20.92■□□□□ 0.94
RGPD1-205ENST00000641339 C9orf78Q9NZ63 289 aaPredicted RBP20.92■□□□□ 0.94
RGPD1-205ENST00000641339 UTYO14607 1347 aa20.92■□□□□ 0.94
RGPD1-205ENST00000641339 ZBED9Q6R2W3 1325 aa20.92■□□□□ 0.94
RGPD1-205ENST00000641339 DUOX1Q9NRD9 1551 aa20.92■□□□□ 0.94
RGPD1-205ENST00000641339 NBPF7P0C2Y1 421 aaPredicted RBP20.91■□□□□ 0.94
RGPD1-205ENST00000641339 ITGA6P23229 1130 aa20.91■□□□□ 0.94
RGPD1-205ENST00000641339 KAZALD1Q96I82 304 aa20.91■□□□□ 0.94
RGPD1-205ENST00000641339 CDC5LQ99459 802 aaKnown RBP20.91■□□□□ 0.94
RGPD1-205ENST00000641339 BSDC1Q9NW68 430 aaPredicted RBP20.91■□□□□ 0.94
RGPD1-205ENST00000641339 FAM161AQ3B820 660 aa20.9■□□□□ 0.94
RGPD1-205ENST00000641339 TBC1D16Q8TBP0 767 aa20.9■□□□□ 0.94
RGPD1-205ENST00000641339 L3MBTL3Q96JM7 780 aaPredicted RBP20.9■□□□□ 0.94
RGPD1-205ENST00000641339 APLP1P51693 650 aa20.89■□□□□ 0.93
RGPD1-205ENST00000641339 HTRA3P83110 453 aa20.89■□□□□ 0.93
RGPD1-205ENST00000641339 NIM1KQ8IY84 436 aa20.89■□□□□ 0.93
RGPD1-205ENST00000641339 MINPP1Q9UNW1 487 aa20.89■□□□□ 0.93
RGPD1-205ENST00000641339 WDR90Q96KV7 1748 aa20.89■□□□□ 0.93
RGPD1-205ENST00000641339 WASHC4Q2M389 1173 aa20.88■□□□□ 0.93
RGPD1-205ENST00000641339 LMBR1LQ6UX01 489 aa20.88■□□□□ 0.93
RGPD1-205ENST00000641339 GPC2Q8N158 579 aa20.88■□□□□ 0.93
RGPD1-205ENST00000641339 RBM46Q8TBY0 533 aaKnown RBP20.88■□□□□ 0.93
RGPD1-205ENST00000641339 SUCLG2Q96I99 432 aa20.88■□□□□ 0.93
RGPD1-205ENST00000641339 USP44Q9H0E7 712 aa20.88■□□□□ 0.93
RGPD1-205ENST00000641339 ZNRF3Q9ULT6 936 aa20.88■□□□□ 0.93
RGPD1-205ENST00000641339 LTBP1Q14766 1721 aa20.87■□□□□ 0.93
RGPD1-205ENST00000641339 WTIPA6NIX2 430 aaPredicted RBP20.87■□□□□ 0.93
RGPD1-205ENST00000641339 C6orf229H3BNL8 230 aa20.87■□□□□ 0.93
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