RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 CHL1O00533 1208 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 FOSBP53539 338 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 SART3Q15020 963 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 PLEKHO1Q53GL0 409 aaPredicted RBP5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 CREB3L3Q68CJ9 461 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 RIC3Q7Z5B4 369 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 RABGGTAQ92696 567 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 IQGAP3Q86VI3 1631 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 UHRF1BP1LA0JNW5 1464 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 RIMS2Q9UQ26 1411 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 NUTM2FA1L443 756 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 YEATS4O95619 227 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 TXLNAP40222 546 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 KCNJ6P48051 423 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 SPAG1Q07617 926 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 NUTM2GQ5VZR2 741 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 TRIM22Q8IYM9 498 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 NAA15Q9BXJ9 866 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 RBM28Q9NW13 759 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 IFNKQ9P0W0 207 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 ZDHHC9Q9Y397 364 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 UNC13BO14795 1591 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 A0A1W2PP64 1363 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 CFAP74Q9C0B2 1584 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 ERLIN2O94905 339 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 CCDC181Q5TID7 509 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 CCDC50Q8IVM0 306 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 GPATCH11Q8N954 259 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 BRF1Q92994 677 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 ZSWIM6Q9HCJ5 1215 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 MED4Q9NPJ6 270 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 VPS18Q9P253 973 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 TAOK2Q9UL54 1235 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 EID1Q9Y6B2 187 aa5.78□□□□□ -1.48
HNRNPU-230ENST00000640657 MSH6P52701 1360 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 RPS6KB1P23443 525 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 NLRP12P59046 1061 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 RBM6P78332 1123 aaKnown RBP5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 MYL5Q02045 173 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 MCM10Q7L590 875 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 NECAB1Q8N987 351 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 CPSF1Q10570 1443 aaKnown RBP5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 MED14O60244 1454 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 F6X3S4 739 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 GIGYF1O75420 1035 aaPredicted RBP5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 ZNF853P0CG23 659 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 NF2P35240 595 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 ACTN2P35609 894 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 CNNM3Q8NE01 707 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 OTUD7AQ8TE49 926 aaPredicted RBP5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 AFAP1L1Q8TED9 768 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 RPGRIP1Q96KN7 1286 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 SYKP43405 635 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 MCM6Q14566 821 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 PLA2G4DQ86XP0 818 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 MICALL1Q8N3F8 863 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 NUDT16Q96DE0 195 aaKnown RBP5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 BAG1Q99933 345 aaPredicted RBP5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 CARD6Q9BX69 1037 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 EMILIN1Q9Y6C2 1016 aa5.77□□□□□ -1.49
HNRNPU-230ENST00000640657 USO1O60763 962 aaKnown RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 ZRSR2Q15696 482 aaKnown RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 FAM71BQ8TC56 605 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 TTF2Q9UNY4 1162 aaKnown RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 SPTLC2O15270 562 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 IL13P35225 146 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 PAFAH1B1P43034 410 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 HNRNPH2P55795 449 aaKnown RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 CHMP4BP1P59074 171 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 PSME1Q06323 249 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 ERCC6LQ2NKX8 1250 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 CT47A1Q5JQC4 288 aaPredicted RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 KIAA1328Q86T90 577 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 EFCAB13Q8IY85 973 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 ZNF710Q8N1W2 664 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 FBXO18Q8NFZ0 1043 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 CACTINQ8WUQ7 758 aaKnown RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 NSFL1CQ9UNZ2 370 aaKnown RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 GOLGA6L10A0A0M3HER8 536 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 WASLO00401 505 aaPredicted RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 BMP15O95972 392 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 CYP2C19P33261 490 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 ARHGAP25P42331 645 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 IRX5P78411 483 aaPredicted RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 FANCCQ00597 558 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 MAPK8IP2Q13387 824 aaPredicted RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 TRIM14Q14142 442 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 WASHC4Q2M389 1173 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 MUM1L1Q5H9M0 696 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 ILDR1Q86SU0 546 aaPredicted RBP5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 SIRT2Q8IXJ6 389 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 ARFGAP2Q8N6H7 521 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 FAM76AQ8TAV0 307 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 ARHGEF10O15013 1369 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 FANCAO15360 1455 aa5.76□□□□□ -1.49
HNRNPU-230ENST00000640657 IQSEC2Q5JU85 1478 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms