RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 C4AP0C0L4 1744 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 CTSWP56202 376 aa10.9□□□□□ -0.66
HLA-B-258ENST00000640615 DDR1Q08345 913 aa10.9□□□□□ -0.66
HLA-B-258ENST00000640615 CNBD1Q8NA66 436 aa10.9□□□□□ -0.66
HLA-B-258ENST00000640615 ZNF784Q8NCA9 323 aaPredicted RBP10.9□□□□□ -0.66
HLA-B-258ENST00000640615 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
HLA-B-258ENST00000640615 DCTPP1Q9H773 170 aa10.9□□□□□ -0.66
HLA-B-258ENST00000640615 PARP3Q9Y6F1 533 aa10.9□□□□□ -0.66
HLA-B-258ENST00000640615 ANKRD36CQ5JPF3 1778 aa10.9□□□□□ -0.67
HLA-B-258ENST00000640615 POLRMTO00411 1230 aaKnown RBP10.89□□□□□ -0.67
HLA-B-258ENST00000640615 SURF6O75683 361 aaKnown RBP10.89□□□□□ -0.67
HLA-B-258ENST00000640615 CSF1RP07333 972 aa10.89□□□□□ -0.67
HLA-B-258ENST00000640615 MMP10P09238 476 aa10.89□□□□□ -0.67
HLA-B-258ENST00000640615 ST5P78524 1137 aa10.89□□□□□ -0.67
HLA-B-258ENST00000640615 SLC10A5Q5PT55 438 aa10.89□□□□□ -0.67
HLA-B-258ENST00000640615 TTLL11Q8NHH1 800 aa10.89□□□□□ -0.67
HLA-B-258ENST00000640615 APBB1O00213 710 aa10.88□□□□□ -0.67
HLA-B-258ENST00000640615 OS9Q13438 667 aaPredicted RBP10.88□□□□□ -0.67
HLA-B-258ENST00000640615 CCDC57Q2TAC2 916 aa10.88□□□□□ -0.67
HLA-B-258ENST00000640615 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
HLA-B-258ENST00000640615 PRR5LQ6MZQ0 368 aa10.88□□□□□ -0.67
HLA-B-258ENST00000640615 SMC5Q8IY18 1101 aa10.88□□□□□ -0.67
HLA-B-258ENST00000640615 NLRP3Q96P20 1036 aa10.88□□□□□ -0.67
HLA-B-258ENST00000640615 GREM2Q9H772 168 aa10.88□□□□□ -0.67
HLA-B-258ENST00000640615 ZBTB47Q9UFB7 747 aaPredicted RBP10.88□□□□□ -0.67
HLA-B-258ENST00000640615 PA2G4Q9UQ80 394 aaKnown RBP10.88□□□□□ -0.67
HLA-B-258ENST00000640615 EXOC6BQ9Y2D4 811 aa10.88□□□□□ -0.67
HLA-B-258ENST00000640615 ANKRD18BA2A2Z9 1011 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 RFX5P48382 616 aaPredicted RBP10.87□□□□□ -0.67
HLA-B-258ENST00000640615 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.678e-6■□□□□ 9
HLA-B-258ENST00000640615 IFIT5Q13325 482 aaKnown RBP10.87□□□□□ -0.67
HLA-B-258ENST00000640615 CCDC152Q4G0S7 254 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 HSP90AB4PQ58FF6 505 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 TAF7LQ5H9L4 462 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 ANKRD45Q5TZF3 282 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 C3orf67Q6ZVT6 689 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 KLHDC4Q8TBB5 520 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 BCL11AQ9H165 835 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 SIL1Q9H173 461 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 ABCC12Q96J65 1359 aa10.87□□□□□ -0.67
HLA-B-258ENST00000640615 GOLGB1Q14789 3259 aaKnown RBP10.87□□□□□ -0.67
HLA-B-258ENST00000640615 ITGA6P23229 1130 aa10.86□□□□□ -0.67
HLA-B-258ENST00000640615 PTPN12Q05209 780 aaKnown RBP10.86□□□□□ -0.67
HLA-B-258ENST00000640615 SF3B3Q15393 1217 aaKnown RBP10.86□□□□□ -0.67
HLA-B-258ENST00000640615 ZNF594Q96JF6 807 aaPredicted RBP10.86□□□□□ -0.67
HLA-B-258ENST00000640615 COPRSQ9NQ92 184 aa10.86□□□□□ -0.67
HLA-B-258ENST00000640615 NOP58Q9Y2X3 529 aaKnown RBP10.86□□□□□ -0.67
HLA-B-258ENST00000640615 RAB11FIP3O75154 756 aa10.85□□□□□ -0.67
HLA-B-258ENST00000640615 NUCB1Q02818 461 aa10.85□□□□□ -0.67
HLA-B-258ENST00000640615 SMARCA5O60264 1052 aaPredicted RBP10.84□□□□□ -0.67
HLA-B-258ENST00000640615 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
HLA-B-258ENST00000640615 ERC1Q8IUD2 1116 aa10.84□□□□□ -0.67
HLA-B-258ENST00000640615 KIF1BPQ96EK5 621 aa10.84□□□□□ -0.67
HLA-B-258ENST00000640615 BRIP1Q9BX63 1249 aa10.84□□□□□ -0.67
HLA-B-258ENST00000640615 LRRCC1Q9C099 1032 aa10.84□□□□□ -0.67
HLA-B-258ENST00000640615 LNPKQ9C0E8 428 aa10.84□□□□□ -0.67
HLA-B-258ENST00000640615 SEC31BQ9NQW1 1179 aa10.84□□□□□ -0.67
HLA-B-258ENST00000640615 RTL9Q8NET4 1388 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 EYA2O00167 538 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 POLD1P28340 1107 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 LRRC24Q50LG9 513 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 LDHAL6AQ6ZMR3 332 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 DDX46Q7L014 1031 aaKnown RBP10.83□□□□□ -0.68
HLA-B-258ENST00000640615 SKAP1Q86WV1 359 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 RPGRQ92834 1020 aaKnown RBP10.83□□□□□ -0.68
HLA-B-258ENST00000640615 CDC5LQ99459 802 aaKnown RBP10.83□□□□□ -0.68
HLA-B-258ENST00000640615 MPHOSPH8Q99549 860 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 PUS3Q9BZE2 481 aaKnown RBP10.83□□□□□ -0.68
HLA-B-258ENST00000640615 IL1RAPL2Q9NP60 686 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 CNNM1Q9NRU3 951 aa10.83□□□□□ -0.68
HLA-B-258ENST00000640615 CIAO1O76071 339 aa10.82□□□□□ -0.68
HLA-B-258ENST00000640615 SASH1O94885 1247 aa10.82□□□□□ -0.68
HLA-B-258ENST00000640615 PDE6BP35913 854 aa10.82□□□□□ -0.68
HLA-B-258ENST00000640615 IGHMBP2P38935 993 aaKnown RBP10.82□□□□□ -0.68
HLA-B-258ENST00000640615 IL15P40933 162 aaPredicted RBP10.82□□□□□ -0.68
HLA-B-258ENST00000640615 RGS3P49796 1198 aa10.82□□□□□ -0.68
HLA-B-258ENST00000640615 ANKRD18AQ8IVF6 992 aa10.82□□□□□ -0.68
HLA-B-258ENST00000640615 RBM17Q96I25 401 aaKnown RBP10.82□□□□□ -0.68
HLA-B-258ENST00000640615 FBXO3Q9UK99 471 aa10.82□□□□□ -0.68
HLA-B-258ENST00000640615 RIC1Q4ADV7 1423 aa10.82□□□□□ -0.68
HLA-B-258ENST00000640615 KLRG2A4D1S0 409 aaPredicted RBP10.81□□□□□ -0.68
HLA-B-258ENST00000640615 TFCP2Q12800 502 aa10.81□□□□□ -0.68
HLA-B-258ENST00000640615 CRY2Q49AN0 593 aa10.81□□□□□ -0.68
HLA-B-258ENST00000640615 ATG9AQ7Z3C6 839 aa10.81□□□□□ -0.68
HLA-B-258ENST00000640615 C16orf71Q8IYS4 520 aaPredicted RBP10.81□□□□□ -0.68
HLA-B-258ENST00000640615 DDX60Q8IY21 1712 aaKnown RBP10.81□□□□□ -0.68
HLA-B-258ENST00000640615 PDE4AP27815 886 aa10.8□□□□□ -0.68
HLA-B-258ENST00000640615 C1QTNF8P60827 252 aa10.8□□□□□ -0.68
HLA-B-258ENST00000640615 RPS8P62241 208 aaKnown RBP10.8□□□□□ -0.68
HLA-B-258ENST00000640615 METTL24Q5JXM2 366 aa10.8□□□□□ -0.68
HLA-B-258ENST00000640615 C2CD5Q86YS7 1000 aa10.8□□□□□ -0.68
HLA-B-258ENST00000640615 CLASRPQ8N2M8 674 aaKnown RBP10.8□□□□□ -0.68
HLA-B-258ENST00000640615 CELF1Q92879 486 aaKnown RBP10.8□□□□□ -0.68
HLA-B-258ENST00000640615 CEP126Q9P2H0 1117 aa10.8□□□□□ -0.68
HLA-B-258ENST00000640615 RIPOR2Q9Y4F9 1068 aa10.8□□□□□ -0.68
HLA-B-258ENST00000640615 H0YIN7 160 aa10.79□□□□□ -0.68
HLA-B-258ENST00000640615 NPR1P16066 1061 aa10.79□□□□□ -0.68
HLA-B-258ENST00000640615 GRAPQ13588 217 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms