RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 ZNF541Q9H0D2 1346 aa12.3□□□□□ -0.44
MCF2L2-214ENST00000640043 BRD1O95696 1058 aa12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 MAP2K2P36507 400 aa12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 AMHR2Q16671 573 aa12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 FAM161AQ3B820 660 aa12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 DDX21Q9NR30 783 aaKnown RBP eCLIP12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 ZNF277Q9NRM2 450 aaPredicted RBP12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 ABT1Q9ULW3 272 aaKnown RBP12.29□□□□□ -0.44
MCF2L2-214ENST00000640043 A1BGP04217 495 aa12.28□□□□□ -0.44
MCF2L2-214ENST00000640043 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
MCF2L2-214ENST00000640043 MAP1SQ66K74 1059 aaPredicted RBP12.28□□□□□ -0.44
MCF2L2-214ENST00000640043 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
MCF2L2-214ENST00000640043 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
MCF2L2-214ENST00000640043 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
MCF2L2-214ENST00000640043 BTBD11A6QL63 1104 aa12.27□□□□□ -0.45
MCF2L2-214ENST00000640043 SNRPA1P09661 255 aaKnown RBP12.27□□□□□ -0.45
MCF2L2-214ENST00000640043 EIF6P56537 245 aaKnown RBP12.27□□□□□ -0.45
MCF2L2-214ENST00000640043 CRY2Q49AN0 593 aa12.27□□□□□ -0.45
MCF2L2-214ENST00000640043 USP50Q70EL3 339 aaPredicted RBP12.27□□□□□ -0.45
MCF2L2-214ENST00000640043 HHIPL1Q96JK4 782 aa12.27□□□□□ -0.45
MCF2L2-214ENST00000640043 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
MCF2L2-214ENST00000640043 NPC1L1Q9UHC9 1359 aa12.27□□□□□ -0.45
MCF2L2-214ENST00000640043 MLLT3P42568 568 aaPredicted RBP12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 SYNE4Q8N205 404 aa12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 POM121Q96HA1 1249 aa12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 GPR101Q96P66 508 aaPredicted RBP12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 MFRPQ9BY79 579 aa12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 VPS33BQ9H267 617 aa12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 NIP7Q9Y221 180 aaKnown RBP eCLIP12.26□□□□□ -0.45
MCF2L2-214ENST00000640043 TLL2Q9Y6L7 1015 aa12.25□□□□□ -0.45
MCF2L2-214ENST00000640043 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
MCF2L2-214ENST00000640043 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
MCF2L2-214ENST00000640043 TNRC18O15417 2968 aaPredicted RBP12.24□□□□□ -0.45
MCF2L2-214ENST00000640043 HOXA10P31260 410 aaPredicted RBP12.24□□□□□ -0.45
MCF2L2-214ENST00000640043 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
MCF2L2-214ENST00000640043 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
MCF2L2-214ENST00000640043 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
MCF2L2-214ENST00000640043 CCDC85CA6NKD9 419 aa12.23□□□□□ -0.45
MCF2L2-214ENST00000640043 PER1O15534 1290 aaPredicted RBP12.23□□□□□ -0.45
MCF2L2-214ENST00000640043 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
MCF2L2-214ENST00000640043 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
MCF2L2-214ENST00000640043 CASP8AP2Q9UKL3 1982 aa12.23□□□□□ -0.45
MCF2L2-214ENST00000640043 NUP98P52948 1817 aa12.23□□□□□ -0.45
MCF2L2-214ENST00000640043 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
MCF2L2-214ENST00000640043 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
MCF2L2-214ENST00000640043 PDE4AP27815 886 aa12.22□□□□□ -0.45
MCF2L2-214ENST00000640043 SCNN1DP51172 638 aa12.22□□□□□ -0.45
MCF2L2-214ENST00000640043 LTBP1Q14766 1721 aa12.22□□□□□ -0.45
MCF2L2-214ENST00000640043 LAMB4A4D0S4 1761 aa12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 PYGBP11216 843 aa12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 MFSD10Q14728 455 aa12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 CST9Q5W186 159 aa12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 SAPCD2Q86UD0 394 aa12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 DHX37Q8IY37 1157 aaKnown RBP12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 RTF1Q92541 710 aaKnown RBP12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 CRAMP1Q96RY5 1269 aa12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.45
MCF2L2-214ENST00000640043 PPP1R37O75864 691 aa12.2□□□□□ -0.46
MCF2L2-214ENST00000640043 EPS15P42566 896 aa12.2□□□□□ -0.46
MCF2L2-214ENST00000640043 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
MCF2L2-214ENST00000640043 OLFM4Q6UX06 510 aa12.2□□□□□ -0.46
MCF2L2-214ENST00000640043 IGSF5Q9NSI5 407 aa12.2□□□□□ -0.46
MCF2L2-214ENST00000640043 GPRC5DQ9NZD1 345 aa12.2□□□□□ -0.46
MCF2L2-214ENST00000640043 PGAP2Q9UHJ9 254 aa12.2□□□□□ -0.46
MCF2L2-214ENST00000640043 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
MCF2L2-214ENST00000640043 KCNQ3O43525 872 aa12.19□□□□□ -0.46
MCF2L2-214ENST00000640043 NBPF10Q6P3W6 841 aaKnown RBP12.19□□□□□ -0.46
MCF2L2-214ENST00000640043 NIM1KQ8IY84 436 aa12.19□□□□□ -0.46
MCF2L2-214ENST00000640043 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
MCF2L2-214ENST00000640043 RBM17Q96I25 401 aaKnown RBP12.19□□□□□ -0.46
MCF2L2-214ENST00000640043 COL4A5P29400 1685 aa12.19□□□□□ -0.46
MCF2L2-214ENST00000640043 NOGQ13253 232 aa12.18□□□□□ -0.46
MCF2L2-214ENST00000640043 SUPT20HQ8NEM7 779 aa12.18□□□□□ -0.46
MCF2L2-214ENST00000640043 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
MCF2L2-214ENST00000640043 CFAP53Q96M91 514 aa12.18□□□□□ -0.46
MCF2L2-214ENST00000640043 MCOLN1Q9GZU1 580 aa12.18□□□□□ -0.46
MCF2L2-214ENST00000640043 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
MCF2L2-214ENST00000640043 PRKAR2BP31323 418 aa12.17□□□□□ -0.46
MCF2L2-214ENST00000640043 MAP2K5Q13163 448 aa12.17□□□□□ -0.46
MCF2L2-214ENST00000640043 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
MCF2L2-214ENST00000640043 CC2D1BQ5T0F9 858 aaKnown RBP12.17□□□□□ -0.46
MCF2L2-214ENST00000640043 PHACTR3Q96KR7 559 aa12.17□□□□□ -0.46
MCF2L2-214ENST00000640043 ABCC12Q96J65 1359 aa12.17□□□□□ -0.46
MCF2L2-214ENST00000640043 MAP3K15Q6ZN16 1313 aa12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 PRAMEF22A3QJZ6 481 aa12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 TRAF5O00463 557 aa12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 PPEF1O14829 653 aaPredicted RBP12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 IRF6O14896 467 aa12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 CELF2O95319 508 aaKnown RBP12.16□□□□□ -0.46
MCF2L2-214ENST00000640043 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms