RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
PAX6-257ENST00000639409 EPB41L2O43491 1005 aaKnown RBP13.25□□□□□ -0.29
PAX6-257ENST00000639409 TNNI3KQ59H18 835 aa13.25□□□□□ -0.29
PAX6-257ENST00000639409 FPGT-TNNI3KV9GXZ4 949 aa13.25□□□□□ -0.29
PAX6-257ENST00000639409 ZDHHC9Q9Y397 364 aa13.24□□□□□ -0.29
PAX6-257ENST00000639409 NMIQ13287 307 aaPredicted RBP13.24□□□□□ -0.29
PAX6-257ENST00000639409 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
PAX6-257ENST00000639409 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
PAX6-257ENST00000639409 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
PAX6-257ENST00000639409 CPA1P15085 419 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 CHAMP1Q96JM3 812 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 BCL9O00512 1426 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 LTBP4Q8N2S1 1624 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 CHGBP05060 677 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 RGS22Q8NE09 1264 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
PAX6-257ENST00000639409 DNAJC2Q99543 621 aaKnown RBP13.23□□□□□ -0.29
PAX6-257ENST00000639409 DBNDD2Q9BQY9 259 aa13.23□□□□□ -0.29
PAX6-257ENST00000639409 CUL4AQ13619 759 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 ADCK5Q3MIX3 580 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 CLEC17AQ6ZS10 378 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 CCDC191Q8NCU4 936 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 ZNF622Q969S3 477 aaKnown RBP eCLIP13.22□□□□□ -0.29
PAX6-257ENST00000639409 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
PAX6-257ENST00000639409 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
PAX6-257ENST00000639409 FSD1Q9BTV5 496 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 NUCB2P80303 420 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 COL9A3Q14050 684 aaPredicted RBP13.22□□□□□ -0.29
PAX6-257ENST00000639409 ATG9AQ7Z3C6 839 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
PAX6-257ENST00000639409 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
PAX6-257ENST00000639409 PHF14O94880 888 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 MCM2P49736 904 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
PAX6-257ENST00000639409 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
PAX6-257ENST00000639409 TTC14Q96N46 770 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 LRP6O75581 1613 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 PHLPP1O60346 1717 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 ADAMTS2O95450 1211 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 LRRC24Q50LG9 513 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.29
PAX6-257ENST00000639409 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.29
PAX6-257ENST00000639409 AK2P54819 239 aa13.2□□□□□ -0.3
PAX6-257ENST00000639409 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
PAX6-257ENST00000639409 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
PAX6-257ENST00000639409 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
PAX6-257ENST00000639409 ATP5JP18859 108 aa13.2□□□□□ -0.3
PAX6-257ENST00000639409 CASTP20810 708 aaKnown RBP13.2□□□□□ -0.3
PAX6-257ENST00000639409 MMP14P50281 582 aa13.2□□□□□ -0.3
PAX6-257ENST00000639409 TCIRG1Q13488 830 aa13.2□□□□□ -0.3
PAX6-257ENST00000639409 NECTIN1Q15223 517 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 HLFQ16534 295 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 CCDC85AQ96PX6 553 aaPredicted RBP13.19□□□□□ -0.3
PAX6-257ENST00000639409 PUS3Q9BZE2 481 aaKnown RBP13.19□□□□□ -0.3
PAX6-257ENST00000639409 RBM8AQ9Y5S9 174 aaKnown RBP13.19□□□□□ -0.3
PAX6-257ENST00000639409 MAFGO15525 162 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 RUFY3Q7L099 469 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 SYNE4Q8N205 404 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
PAX6-257ENST00000639409 ANKRD36CQ5JPF3 1778 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 EXOC5O00471 708 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 LARGE1O95461 756 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 TIMM10P62072 90 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
PAX6-257ENST00000639409 SNRKQ9NRH2 765 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 ZNF609O15014 1411 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 DTNBO60941 627 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 KIF6Q6ZMV9 814 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
PAX6-257ENST00000639409 MAP4K1Q92918 833 aa13.18□□□□□ -0.3
PAX6-257ENST00000639409 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
PAX6-257ENST00000639409 HIP1O00291 1037 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 STARD3NLO95772 234 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
PAX6-257ENST00000639409 GPTP24298 496 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
PAX6-257ENST00000639409 CREB3L3Q68CJ9 461 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 GPATCH11Q8N954 259 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 KCNB2Q92953 911 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
PAX6-257ENST00000639409 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 JCADQ9P266 1359 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 NUP98P52948 1817 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 SLFNL1Q499Z3 407 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 NEUROD6Q96NK8 337 aa13.17□□□□□ -0.3
PAX6-257ENST00000639409 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
PAX6-257ENST00000639409 EYA2O00167 538 aa13.16□□□□□ -0.3
PAX6-257ENST00000639409 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
PAX6-257ENST00000639409 HAUS7Q99871 368 aa13.16□□□□□ -0.3
PAX6-257ENST00000639409 SPATA31A1Q5TZJ5 1347 aa13.16□□□□□ -0.3
PAX6-257ENST00000639409 RPAP1Q9BWH6 1393 aaPredicted RBP13.16□□□□□ -0.3
PAX6-257ENST00000639409 SLC27A2O14975 620 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms