RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 IRS4O14654 1257 aaPredicted RBP11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 HMGB2P26583 209 aaKnown RBP11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 MCM4P33991 863 aa11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 RABL6Q3YEC7 729 aaPredicted RBP11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 KLHDC4Q8TBB5 520 aa11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 GCC1Q96CN9 775 aa11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 SETDB2Q96T68 719 aa11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 PA2G4Q9UQ80 394 aaKnown RBP11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 PNPLA7Q6ZV29 1317 aa11.31□□□□□ -0.6
HNRNPU-218ENST00000639064 RGL2O15211 777 aa11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 HCLS1P14317 486 aaPredicted RBP11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 CHMP3Q9Y3E7 222 aa11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 SH3TC1Q8TE82 1336 aa11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 NFIXQ14938 502 aa11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 CDHR2Q9BYE9 1310 aa11.3□□□□□ -0.6
HNRNPU-218ENST00000639064 SURF6O75683 361 aaKnown RBP11.29□□□□□ -0.6
HNRNPU-218ENST00000639064 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
HNRNPU-218ENST00000639064 LNPKQ9C0E8 428 aa11.29□□□□□ -0.6
HNRNPU-218ENST00000639064 SMARCA5O60264 1052 aaPredicted RBP11.29□□□□□ -0.6
HNRNPU-218ENST00000639064 ERFEQ4G0M1 354 aa11.29□□□□□ -0.6
HNRNPU-218ENST00000639064 STK32BQ9NY57 414 aa11.29□□□□□ -0.6
HNRNPU-218ENST00000639064 NUCB1Q02818 461 aa11.28□□□□□ -0.6
HNRNPU-218ENST00000639064 PLA2G12BQ9BX93 195 aa11.28□□□□□ -0.6
HNRNPU-218ENST00000639064 RFX5P48382 616 aaPredicted RBP11.28□□□□□ -0.6
HNRNPU-218ENST00000639064 CHD1LQ86WJ1 897 aa11.28□□□□□ -0.6
HNRNPU-218ENST00000639064 NBPF5PQ86XG9 351 aaPredicted RBP11.28□□□□□ -0.6
HNRNPU-218ENST00000639064 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
HNRNPU-218ENST00000639064 PDGFDQ9GZP0 370 aaPredicted RBP11.28□□□□□ -0.6
HNRNPU-218ENST00000639064 SIL1Q9H173 461 aa11.28□□□□□ -0.6
HNRNPU-218ENST00000639064 PDE8AO60658 829 aa11.27□□□□□ -0.6
HNRNPU-218ENST00000639064 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.6
HNRNPU-218ENST00000639064 CTSWP56202 376 aa11.27□□□□□ -0.6
HNRNPU-218ENST00000639064 TTLL11Q8NHH1 800 aa11.27□□□□□ -0.6
HNRNPU-218ENST00000639064 ABCC12Q96J65 1359 aa11.27□□□□□ -0.6
HNRNPU-218ENST00000639064 COL24A1Q17RW2 1714 aa11.27□□□□□ -0.61
HNRNPU-218ENST00000639064 CSF1RP07333 972 aa11.27□□□□□ -0.61
HNRNPU-218ENST00000639064 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
HNRNPU-218ENST00000639064 PTPN12Q05209 780 aaKnown RBP11.27□□□□□ -0.61
HNRNPU-218ENST00000639064 MSL1Q68DK7 614 aa11.27□□□□□ -0.61
HNRNPU-218ENST00000639064 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
HNRNPU-218ENST00000639064 ZNF594Q96JF6 807 aaPredicted RBP11.27□□□□□ -0.61
HNRNPU-218ENST00000639064 CARMIL3Q8ND23 1372 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 TM4SF1P30408 202 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 C22orf23Q9BZE7 217 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 GREM2Q9H772 168 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 CHMP5Q9NZZ3 219 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 DDX60Q8IY21 1712 aaKnown RBP11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 TRAK2O60296 914 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 DDR1Q08345 913 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 TPTE2Q6XPS3 522 aa11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 C16orf71Q8IYS4 520 aaPredicted RBP11.26□□□□□ -0.61
HNRNPU-218ENST00000639064 NPHP1O15259 732 aa11.25□□□□□ -0.61
HNRNPU-218ENST00000639064 NYXQ9GZU5 481 aa11.25□□□□□ -0.61
HNRNPU-218ENST00000639064 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
HNRNPU-218ENST00000639064 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-218ENST00000639064 OS9Q13438 667 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-218ENST00000639064 CCDC57Q2TAC2 916 aa11.25□□□□□ -0.61
HNRNPU-218ENST00000639064 LRRCC1Q9C099 1032 aa11.25□□□□□ -0.61
HNRNPU-218ENST00000639064 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
HNRNPU-218ENST00000639064 POLRMTO00411 1230 aaKnown RBP11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 SERPINB2P05120 415 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 ITGA6P23229 1130 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 PRR5LQ6MZQ0 368 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 NLGN1Q8N2Q7 840 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 RHPN1Q8TCX5 695 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 OTUD7AQ8TE49 926 aaPredicted RBP11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 MYH3P11055 1940 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 SASH1O94885 1247 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 CLCN1P35523 988 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 G3BP1Q13283 466 aaKnown RBP eCLIP11.24□□□□□ -0.618e-8■■□□□ 13.8
HNRNPU-218ENST00000639064 IFIT5Q13325 482 aaKnown RBP11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 CNBD1Q8NA66 436 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 PUS3Q9BZE2 481 aaKnown RBP11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 SEC31BQ9NQW1 1179 aa11.24□□□□□ -0.61
HNRNPU-218ENST00000639064 LRRC24Q50LG9 513 aa11.23□□□□□ -0.61
HNRNPU-218ENST00000639064 SLC10A5Q5PT55 438 aa11.23□□□□□ -0.61
HNRNPU-218ENST00000639064 ILDR2Q71H61 639 aa11.23□□□□□ -0.61
HNRNPU-218ENST00000639064 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
HNRNPU-218ENST00000639064 MMP10P09238 476 aa11.23□□□□□ -0.61
HNRNPU-218ENST00000639064 HSP90AB4PQ58FF6 505 aa11.23□□□□□ -0.61
HNRNPU-218ENST00000639064 KIF1BPQ96EK5 621 aa11.23□□□□□ -0.61
HNRNPU-218ENST00000639064 LAMB2P55268 1798 aa11.23□□□□□ -0.61
HNRNPU-218ENST00000639064 TAF7LQ5H9L4 462 aa11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 MRE11P49959 708 aa11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 ATG9AQ7Z3C6 839 aa11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 HSCBQ8IWL3 235 aa11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 COL4A1P02462 1669 aa11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 HSP90B1P14625 803 aaKnown RBP11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 NLRP3Q96P20 1036 aa11.22□□□□□ -0.61
HNRNPU-218ENST00000639064 TNRC6CQ9HCJ0 1690 aaKnown RBP11.21□□□□□ -0.61
HNRNPU-218ENST00000639064 QSER1Q2KHR3 1735 aa11.21□□□□□ -0.61
HNRNPU-218ENST00000639064 EYA2O00167 538 aa11.21□□□□□ -0.61
HNRNPU-218ENST00000639064 TFCP2Q12800 502 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms