RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 DDX49Q9Y6V7 483 aaKnown RBP12.7□□□□□ -0.38
PAX6-235ENST00000638629 HS1BP3Q53T59 392 aa12.7□□□□□ -0.38
PAX6-235ENST00000638629 CLASRPQ8N2M8 674 aaKnown RBP12.7□□□□□ -0.38
PAX6-235ENST00000638629 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
PAX6-235ENST00000638629 NASPP49321 788 aaPredicted RBP12.7□□□□□ -0.38
PAX6-235ENST00000638629 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
PAX6-235ENST00000638629 IL17RAQ96F46 866 aa12.7□□□□□ -0.38
PAX6-235ENST00000638629 NUP98P52948 1817 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 ERC2O15083 957 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 CAMTA2O94983 1202 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 AOX1Q06278 1338 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 COL5A3P25940 1745 aaPredicted RBP12.69□□□□□ -0.38
PAX6-235ENST00000638629 MCM2P49736 904 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 ANP32BQ92688 251 aaKnown RBP12.69□□□□□ -0.38
PAX6-235ENST00000638629 PLA2G12BQ9BX93 195 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 LMBRD1Q9NUN5 540 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
PAX6-235ENST00000638629 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
PAX6-235ENST00000638629 ZNF772Q68DY9 489 aaPredicted RBP12.68□□□□□ -0.38
PAX6-235ENST00000638629 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
PAX6-235ENST00000638629 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
PAX6-235ENST00000638629 CNTNAP4Q9C0A0 1308 aa12.68□□□□□ -0.38
PAX6-235ENST00000638629 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
PAX6-235ENST00000638629 KRT27Q7Z3Y8 459 aa12.68□□□□□ -0.38
PAX6-235ENST00000638629 SYNE4Q8N205 404 aa12.68□□□□□ -0.38
PAX6-235ENST00000638629 NAP1L5Q96NT1 182 aaPredicted RBP12.68□□□□□ -0.38
PAX6-235ENST00000638629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.68□□□□□ -0.38
PAX6-235ENST00000638629 CDHR2Q9BYE9 1310 aa12.68□□□□□ -0.38
PAX6-235ENST00000638629 ANKRD36CQ5JPF3 1778 aa12.68□□□□□ -0.38
PAX6-235ENST00000638629 IFIT2P09913 472 aaKnown RBP12.67□□□□□ -0.38
PAX6-235ENST00000638629 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
PAX6-235ENST00000638629 FAM196AQ6ZSG2 479 aa12.67□□□□□ -0.38
PAX6-235ENST00000638629 AACSQ86V21 672 aa12.67□□□□□ -0.38
PAX6-235ENST00000638629 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
PAX6-235ENST00000638629 ANAPC15P60006 121 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 RBM6P78332 1123 aaKnown RBP12.66□□□□□ -0.38
PAX6-235ENST00000638629 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 PI4K2BQ8TCG2 481 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 EAF2Q96CJ1 260 aaPredicted RBP12.66□□□□□ -0.38
PAX6-235ENST00000638629 USP42Q9H9J4 1324 aaKnown RBP12.66□□□□□ -0.38
PAX6-235ENST00000638629 CSF1RP07333 972 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 TTC41PQ6P2S7 1318 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 PKNOX2Q96KN3 472 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
PAX6-235ENST00000638629 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 TFCP2Q12800 502 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
PAX6-235ENST00000638629 TPM2P07951 284 aa12.65□□□□□ -0.38
PAX6-235ENST00000638629 RILPL2Q969X0 211 aa12.65□□□□□ -0.38
PAX6-235ENST00000638629 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
PAX6-235ENST00000638629 CCDC8Q9H0W5 538 aaPredicted RBP12.65□□□□□ -0.38
PAX6-235ENST00000638629 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
PAX6-235ENST00000638629 CCDC57Q2TAC2 916 aa12.65□□□□□ -0.38
PAX6-235ENST00000638629 PARP10Q53GL7 1025 aa12.65□□□□□ -0.38
PAX6-235ENST00000638629 PDLIM2Q96JY6 352 aa12.65□□□□□ -0.38
PAX6-235ENST00000638629 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
PAX6-235ENST00000638629 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
PAX6-235ENST00000638629 RRP9O43818 475 aaKnown RBP12.64□□□□□ -0.39
PAX6-235ENST00000638629 TERF1P54274 439 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 CLEC4GQ6UXB4 293 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 GPATCH3Q96I76 525 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 CCDC85AQ96PX6 553 aaPredicted RBP12.64□□□□□ -0.39
PAX6-235ENST00000638629 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
PAX6-235ENST00000638629 LY75O60449 1722 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 EYA2O00167 538 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 PDE8AO60658 829 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
PAX6-235ENST00000638629 CUL4AQ13619 759 aa12.64□□□□□ -0.39
PAX6-235ENST00000638629 INTS4Q96HW7 963 aaKnown RBP12.64□□□□□ -0.39
PAX6-235ENST00000638629 UTP14AQ9BVJ6 771 aaKnown RBP12.64□□□□□ -0.39
PAX6-235ENST00000638629 FAM177BA6PVY3 158 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 GNPATO15228 680 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 MAP4K4O95819 1239 aaPredicted RBP12.63□□□□□ -0.39
PAX6-235ENST00000638629 IL15P40933 162 aaPredicted RBP12.63□□□□□ -0.39
PAX6-235ENST00000638629 TNNI3KQ59H18 835 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 ZDHHC9Q9Y397 364 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 FPGT-TNNI3KV9GXZ4 949 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 MBD3O95983 291 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 CTSWP56202 376 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 LRRC24Q50LG9 513 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 TLR7Q9NYK1 1049 aaKnown RBP12.63□□□□□ -0.39
PAX6-235ENST00000638629 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
PAX6-235ENST00000638629 CIAO1O76071 339 aa12.62□□□□□ -0.39
PAX6-235ENST00000638629 TRIM37O94972 964 aa12.62□□□□□ -0.39
PAX6-235ENST00000638629 MCCP23508 829 aa12.62□□□□□ -0.39
PAX6-235ENST00000638629 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
PAX6-235ENST00000638629 PUS3Q9BZE2 481 aaKnown RBP12.62□□□□□ -0.39
PAX6-235ENST00000638629 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
PAX6-235ENST00000638629 CAVIN1Q6NZI2 390 aaKnown RBP12.62□□□□□ -0.39
PAX6-235ENST00000638629 ESYT1Q9BSJ8 1104 aa12.62□□□□□ -0.39
PAX6-235ENST00000638629 NARFQ9UHQ1 456 aa12.62□□□□□ -0.39
PAX6-235ENST00000638629 RGL2O15211 777 aa12.61□□□□□ -0.39
PAX6-235ENST00000638629 PKP1Q13835 747 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms