RNA–Protein interactions for RNA: ENST00000638475.1

HNRNPU-214, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-214ENST00000638475 USPL1Q5W0Q7 1092 aa18.37■□□□□ 0.53
HNRNPU-214ENST00000638475 TBC1D32Q96NH3 1257 aa18.37■□□□□ 0.53
HNRNPU-214ENST00000638475 UPF2Q9HAU5 1272 aaKnown RBP18.37■□□□□ 0.53
HNRNPU-214ENST00000638475 NUP188Q5SRE5 1749 aa18.37■□□□□ 0.53
HNRNPU-214ENST00000638475 RREB1Q92766 1687 aa18.37■□□□□ 0.53
HNRNPU-214ENST00000638475 N4BP2Q86UW6 1770 aaPredicted RBP18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 H7C1W4 665 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 ZPR1O75312 459 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 NLRP10Q86W26 655 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 FAM89AQ96GI7 184 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 FAM177BA6PVY3 158 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 RFC4P35249 363 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 EZH2Q15910 746 aaKnown RBP18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 PPP1R42Q7Z4L9 355 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 ZNF34Q8IZ26 560 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 C4BP0C0L5 1744 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 ZNF500O60304 480 aaPredicted RBP18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 SYNE4Q8N205 404 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 NARFQ9UHQ1 456 aa18.36■□□□□ 0.53
HNRNPU-214ENST00000638475 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 SECISBP2LQ93073 1101 aaKnown RBP18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 HDAC5Q9UQL6 1122 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 NIP7Q9Y221 180 aaKnown RBP eCLIP18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 UBN2Q6ZU65 1347 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 SRGAP3O43295 1099 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 CASP7P55210 303 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 SASS6Q6UVJ0 657 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 BICDL1Q6ZP65 573 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 TSC1Q92574 1164 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 TFCP2L1Q9NZI6 479 aa18.35■□□□□ 0.53
HNRNPU-214ENST00000638475 HMMRO75330 724 aa18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 DEFB132Q7Z7B7 95 aa18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 DHX37Q8IY37 1157 aaKnown RBP18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 TRMT112Q9UI30 125 aaKnown RBP18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 ZNF652Q9Y2D9 606 aa18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 CLEC4GQ6UXB4 293 aa18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 CAMKK2Q96RR4 588 aa18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 BCL2L12Q9HB09 334 aa18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 NOL7Q9UMY1 257 aaKnown RBP18.34■□□□□ 0.53
HNRNPU-214ENST00000638475 AFDNP55196 1824 aaKnown RBP18.33■□□□□ 0.53
HNRNPU-214ENST00000638475 SMC5Q8IY18 1101 aa18.33■□□□□ 0.53
HNRNPU-214ENST00000638475 NUP98P52948 1817 aa18.33■□□□□ 0.53
HNRNPU-214ENST00000638475 ZNF827Q17R98 1081 aa18.33■□□□□ 0.52
HNRNPU-214ENST00000638475 SUSD4Q5VX71 490 aa18.33■□□□□ 0.52
HNRNPU-214ENST00000638475 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.52
HNRNPU-214ENST00000638475 APBB1O00213 710 aa18.32■□□□□ 0.52
HNRNPU-214ENST00000638475 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
HNRNPU-214ENST00000638475 IBTKQ9P2D0 1353 aaPredicted RBP18.32■□□□□ 0.52
HNRNPU-214ENST00000638475 PDZRN3Q9UPQ7 1066 aa18.32■□□□□ 0.52
HNRNPU-214ENST00000638475 PCCAP05165 728 aaPredicted RBP18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 TBC1D9BQ66K14 1250 aa18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 TEX2Q8IWB9 1127 aa18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 SSH3Q8TE77 659 aa18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 GCC1Q96CN9 775 aa18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 TNS1Q9HBL0 1735 aaKnown RBP18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 ANKRD45Q5TZF3 282 aa18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 TAF3Q5VWG9 929 aa18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 EXOC6BQ9Y2D4 811 aa18.31■□□□□ 0.52
HNRNPU-214ENST00000638475 ADRA2BP18089 450 aa18.3■□□□□ 0.52
HNRNPU-214ENST00000638475 SSFA2P28290 1259 aa18.3■□□□□ 0.52
HNRNPU-214ENST00000638475 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
HNRNPU-214ENST00000638475 USP42Q9H9J4 1324 aaKnown RBP18.3■□□□□ 0.52
HNRNPU-214ENST00000638475 BAG6P46379 1132 aa18.3■□□□□ 0.52
HNRNPU-214ENST00000638475 LMBR1LQ6UX01 489 aa18.3■□□□□ 0.52
HNRNPU-214ENST00000638475 SPDYE4A6NLX3 237 aa18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 FOXO4P98177 505 aa18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 MTX1Q13505 466 aa18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 ZNF710Q8N1W2 664 aa18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 POLA2Q14181 598 aa18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 CSPP1Q1MSJ5 1256 aa18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 CERS3Q8IU89 383 aa18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 UTP14AQ9BVJ6 771 aaKnown RBP18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 CHMP3Q9Y3E7 222 aa18.29■□□□□ 0.52
HNRNPU-214ENST00000638475 PARP10Q53GL7 1025 aa18.28■□□□□ 0.52
HNRNPU-214ENST00000638475 SETDB2Q96T68 719 aa18.28■□□□□ 0.52
HNRNPU-214ENST00000638475 IRS4O14654 1257 aaPredicted RBP18.28■□□□□ 0.52
HNRNPU-214ENST00000638475 SURF6O75683 361 aaKnown RBP18.28■□□□□ 0.52
HNRNPU-214ENST00000638475 IRX5P78411 483 aaPredicted RBP18.28■□□□□ 0.52
HNRNPU-214ENST00000638475 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
HNRNPU-214ENST00000638475 CCDC85AQ96PX6 553 aaPredicted RBP18.28■□□□□ 0.52
HNRNPU-214ENST00000638475 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
HNRNPU-214ENST00000638475 TNPO1Q92973 898 aaKnown RBP18.27■□□□□ 0.52
HNRNPU-214ENST00000638475 LNPKQ9C0E8 428 aa18.27■□□□□ 0.52
HNRNPU-214ENST00000638475 PA2G4Q9UQ80 394 aaKnown RBP18.27■□□□□ 0.52
HNRNPU-214ENST00000638475 NUCB1Q02818 461 aa18.27■□□□□ 0.52
HNRNPU-214ENST00000638475 RABL6Q3YEC7 729 aaPredicted RBP18.26■□□□□ 0.51
HNRNPU-214ENST00000638475 HCLS1P14317 486 aaPredicted RBP18.26■□□□□ 0.51
HNRNPU-214ENST00000638475 CHD1LQ86WJ1 897 aa18.26■□□□□ 0.51
HNRNPU-214ENST00000638475 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
HNRNPU-214ENST00000638475 SH3TC1Q8TE82 1336 aa18.26■□□□□ 0.51
HNRNPU-214ENST00000638475 GYS1P13807 737 aa18.26■□□□□ 0.51
HNRNPU-214ENST00000638475 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
HNRNPU-214ENST00000638475 HS1BP3Q53T59 392 aa18.26■□□□□ 0.51
HNRNPU-214ENST00000638475 UBR3Q6ZT12 1888 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms