RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 DDX19BQ9UMR2 479 aa24.4■■□□□ 1.5
HLA-A-209ENST00000638375 CSF1RP07333 972 aa24.39■■□□□ 1.49
HLA-A-209ENST00000638375 ANKRD44Q8N8A2 993 aa24.39■■□□□ 1.49
HLA-A-209ENST00000638375 CCDC85AQ96PX6 553 aaPredicted RBP24.39■■□□□ 1.49
HLA-A-209ENST00000638375 BICC1Q9H694 974 aaKnown RBP24.39■■□□□ 1.49
HLA-A-209ENST00000638375 LRRFIP2Q9Y608 721 aaKnown RBP24.39■■□□□ 1.49
HLA-A-209ENST00000638375 NPR1P16066 1061 aa24.38■■□□□ 1.49
HLA-A-209ENST00000638375 HOXA10P31260 410 aaPredicted RBP24.38■■□□□ 1.49
HLA-A-209ENST00000638375 RPGRQ92834 1020 aaKnown RBP24.38■■□□□ 1.49
HLA-A-209ENST00000638375 MASTLQ96GX5 879 aa24.38■■□□□ 1.49
HLA-A-209ENST00000638375 DLEC1Q9Y238 1755 aa24.38■■□□□ 1.49
HLA-A-209ENST00000638375 RABL6Q3YEC7 729 aaPredicted RBP24.37■■□□□ 1.49
HLA-A-209ENST00000638375 CCDC152Q4G0S7 254 aa24.37■■□□□ 1.49
HLA-A-209ENST00000638375 STYK1Q6J9G0 422 aa24.37■■□□□ 1.49
HLA-A-209ENST00000638375 LMBR1LQ6UX01 489 aa24.37■■□□□ 1.49
HLA-A-209ENST00000638375 ZNF622Q969S3 477 aaKnown RBP eCLIP24.37■■□□□ 1.49
HLA-A-209ENST00000638375 CRBNQ96SW2 442 aa24.37■■□□□ 1.49
HLA-A-209ENST00000638375 MYH3P11055 1940 aa24.37■■□□□ 1.49
HLA-A-209ENST00000638375 FAM161AQ3B820 660 aa24.36■■□□□ 1.49
HLA-A-209ENST00000638375 GREM2Q9H772 168 aa24.36■■□□□ 1.49
HLA-A-209ENST00000638375 COL4A1P02462 1669 aa24.36■■□□□ 1.49
HLA-A-209ENST00000638375 RTL9Q8NET4 1388 aa24.35■■□□□ 1.49
HLA-A-209ENST00000638375 GNAI2P04899 355 aa24.35■■□□□ 1.49
HLA-A-209ENST00000638375 RBM17Q96I25 401 aaKnown RBP24.35■■□□□ 1.49
HLA-A-209ENST00000638375 C1orf115Q9H7X2 142 aa24.35■■□□□ 1.49
HLA-A-209ENST00000638375 SEC31BQ9NQW1 1179 aa24.35■■□□□ 1.49
HLA-A-209ENST00000638375 WWC3Q9ULE0 1092 aa24.35■■□□□ 1.49
HLA-A-209ENST00000638375 DDX46Q7L014 1031 aaKnown RBP24.34■■□□□ 1.49
HLA-A-209ENST00000638375 CRAMP1Q96RY5 1269 aa24.34■■□□□ 1.49
HLA-A-209ENST00000638375 ZBTB40Q9NUA8 1239 aa24.34■■□□□ 1.49
HLA-A-209ENST00000638375 PIM2Q9P1W9 311 aa24.34■■□□□ 1.49
HLA-A-209ENST00000638375 HDAC5Q9UQL6 1122 aa24.34■■□□□ 1.49
HLA-A-209ENST00000638375 BRCA1P38398 1863 aaKnown RBP24.34■■□□□ 1.49
HLA-A-209ENST00000638375 CHMP3Q9Y3E7 222 aa24.33■■□□□ 1.49
HLA-A-209ENST00000638375 CELF1Q92879 486 aaKnown RBP24.32■■□□□ 1.48
HLA-A-209ENST00000638375 CNKSR1Q969H4 720 aa24.32■■□□□ 1.48
HLA-A-209ENST00000638375 ITGA6P23229 1130 aa24.31■■□□□ 1.48
HLA-A-209ENST00000638375 ALDH1B1P30837 517 aa24.31■■□□□ 1.48
HLA-A-209ENST00000638375 IRX6P78412 446 aaPredicted RBP24.31■■□□□ 1.48
HLA-A-209ENST00000638375 GRAPQ13588 217 aa24.31■■□□□ 1.48
HLA-A-209ENST00000638375 TTLL6Q8N841 843 aa24.31■■□□□ 1.48
HLA-A-209ENST00000638375 GRAPLQ8TC17 118 aaPredicted RBP24.31■■□□□ 1.48
HLA-A-209ENST00000638375 PRPF40BQ6NWY9 871 aaKnown RBP24.3■■□□□ 1.48
HLA-A-209ENST00000638375 CHMP4BQ9H444 224 aaKnown RBP24.3■■□□□ 1.48
HLA-A-209ENST00000638375 TAF1P21675 1872 aa24.3■■□□□ 1.48
HLA-A-209ENST00000638375 MTX1Q13505 466 aa24.29■■□□□ 1.48
HLA-A-209ENST00000638375 DALRD3Q5D0E6 543 aaKnown RBP24.29■■□□□ 1.48
HLA-A-209ENST00000638375 SLC51AQ86UW1 340 aa24.29■■□□□ 1.48
HLA-A-209ENST00000638375 SLX4Q8IY92 1834 aa24.28■■□□□ 1.48
HLA-A-209ENST00000638375 ANKRD18BA2A2Z9 1011 aa24.28■■□□□ 1.48
HLA-A-209ENST00000638375 IFIT5Q13325 482 aaKnown RBP24.28■■□□□ 1.48
HLA-A-209ENST00000638375 EXOC6Q8TAG9 804 aa24.28■■□□□ 1.48
HLA-A-209ENST00000638375 RFX5P48382 616 aaPredicted RBP24.27■■□□□ 1.48
HLA-A-209ENST00000638375 RPS8P62241 208 aaKnown RBP24.27■■□□□ 1.48
HLA-A-209ENST00000638375 CCDC57Q2TAC2 916 aa24.27■■□□□ 1.48
HLA-A-209ENST00000638375 CDC5LQ99459 802 aaKnown RBP24.27■■□□□ 1.48
HLA-A-209ENST00000638375 BCS1LQ9Y276 419 aa24.27■■□□□ 1.48
HLA-A-209ENST00000638375 CACNA1SQ13698 1873 aa24.26■■□□□ 1.47
HLA-A-209ENST00000638375 PNMA6EA0A0J9YXQ4 647 aa24.26■■□□□ 1.47
HLA-A-209ENST00000638375 PPEF1O14829 653 aaPredicted RBP24.26■■□□□ 1.47
HLA-A-209ENST00000638375 BBOX1O75936 387 aa24.26■■□□□ 1.47
HLA-A-209ENST00000638375 CEP85Q6P2H3 762 aa24.26■■□□□ 1.47
HLA-A-209ENST00000638375 ZNF594Q96JF6 807 aaPredicted RBP24.26■■□□□ 1.47
HLA-A-209ENST00000638375 ANKRD18AQ8IVF6 992 aa24.25■■□□□ 1.47
HLA-A-209ENST00000638375 C7orf43Q8WVR3 580 aa24.25■■□□□ 1.47
HLA-A-209ENST00000638375 SRGAP3O43295 1099 aa24.24■■□□□ 1.47
HLA-A-209ENST00000638375 YBX3P16989 372 aaKnown RBP eCLIP24.24■■□□□ 1.47
HLA-A-209ENST00000638375 ATP8B2P98198 1209 aa24.24■■□□□ 1.47
HLA-A-209ENST00000638375 OLFM4Q6UX06 510 aa24.24■■□□□ 1.47
HLA-A-209ENST00000638375 KLHDC4Q8TBB5 520 aa24.24■■□□□ 1.47
HLA-A-209ENST00000638375 ZNF219Q9P2Y4 722 aaPredicted RBP24.24■■□□□ 1.47
HLA-A-209ENST00000638375 C21orf2O43822 256 aa24.23■■□□□ 1.47
HLA-A-209ENST00000638375 IGHMBP2P38935 993 aaKnown RBP24.22■■□□□ 1.47
HLA-A-209ENST00000638375 PTPN12Q05209 780 aaKnown RBP24.22■■□□□ 1.47
HLA-A-209ENST00000638375 POLA2Q14181 598 aa24.22■■□□□ 1.47
HLA-A-209ENST00000638375 PELP1Q8IZL8 1130 aaKnown RBP24.22■■□□□ 1.47
HLA-A-209ENST00000638375 ATP6V0A2Q9Y487 856 aa24.22■■□□□ 1.47
HLA-A-209ENST00000638375 TAF7LQ5H9L4 462 aa24.21■■□□□ 1.47
HLA-A-209ENST00000638375 TMC4Q7Z404 712 aa24.21■■□□□ 1.47
HLA-A-209ENST00000638375 SIRT2Q8IXJ6 389 aa24.21■■□□□ 1.47
HLA-A-209ENST00000638375 SP8Q8IXZ3 490 aa24.21■■□□□ 1.47
HLA-A-209ENST00000638375 SSH3Q8TE77 659 aa24.21■■□□□ 1.47
HLA-A-209ENST00000638375 BSDC1Q9NW68 430 aaPredicted RBP24.21■■□□□ 1.47
HLA-A-209ENST00000638375 SPEF2Q9C093 1822 aa24.2■■□□□ 1.46
HLA-A-209ENST00000638375 ARFGEF1Q9Y6D6 1849 aa24.2■■□□□ 1.46
HLA-A-209ENST00000638375 RPAP2Q8IXW5 612 aaPredicted RBP24.2■■□□□ 1.46
HLA-A-209ENST00000638375 PUS3Q9BZE2 481 aaKnown RBP24.2■■□□□ 1.46
HLA-A-209ENST00000638375 PA2G4Q9UQ80 394 aaKnown RBP24.2■■□□□ 1.46
HLA-A-209ENST00000638375 PCDHB15Q9Y5E8 787 aa24.2■■□□□ 1.46
HLA-A-209ENST00000638375 LRRC37AA6NMS7 1700 aa24.2■■□□□ 1.46
HLA-A-209ENST00000638375 SNED1Q8TER0 1413 aa24.19■■□□□ 1.46
HLA-A-209ENST00000638375 MPHOSPH8Q99549 860 aa24.19■■□□□ 1.46
HLA-A-209ENST00000638375 COPRSQ9NQ92 184 aa24.19■■□□□ 1.46
HLA-A-209ENST00000638375 GPR162Q16538 588 aa24.18■■□□□ 1.46
HLA-A-209ENST00000638375 LRRC24Q50LG9 513 aa24.18■■□□□ 1.46
HLA-A-209ENST00000638375 LDHAL6AQ6ZMR3 332 aa24.18■■□□□ 1.46
HLA-A-209ENST00000638375 AAMPQ13685 434 aa24.17■■□□□ 1.46
HLA-A-209ENST00000638375 MINPP1Q9UNW1 487 aa24.17■■□□□ 1.46
HLA-A-209ENST00000638375 CCDC93Q567U6 631 aa24.16■■□□□ 1.46
HLA-A-209ENST00000638375 CC2D2BQ6DHV5 1058 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms