RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 AKAP2Q9Y2D5 859 aa12.69□□□□□ -0.38
LINC00598-216ENST00000638163 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
LINC00598-216ENST00000638163 QSER1Q2KHR3 1735 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 EYA2O00167 538 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 NPHP1O15259 732 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 PHF14O94880 888 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 MX1P20591 662 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
LINC00598-216ENST00000638163 KCNQ4P56696 695 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 ST5P78524 1137 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 SF3B3Q15393 1217 aaKnown RBP12.68□□□□□ -0.38
LINC00598-216ENST00000638163 EPHA10Q5JZY3 1008 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 STAP2Q9UGK3 403 aa12.68□□□□□ -0.38
LINC00598-216ENST00000638163 IFIT2P09913 472 aaKnown RBP12.67□□□□□ -0.38
LINC00598-216ENST00000638163 GYS1P13807 737 aa12.67□□□□□ -0.38
LINC00598-216ENST00000638163 TBC1D9BQ66K14 1250 aa12.67□□□□□ -0.38
LINC00598-216ENST00000638163 CNBD1Q8NA66 436 aa12.67□□□□□ -0.38
LINC00598-216ENST00000638163 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
LINC00598-216ENST00000638163 ABCC12Q96J65 1359 aa12.67□□□□□ -0.38
LINC00598-216ENST00000638163 MYH3P11055 1940 aa12.66□□□□□ -0.38
LINC00598-216ENST00000638163 MROH5Q6ZUA9 1318 aa12.66□□□□□ -0.38
LINC00598-216ENST00000638163 GLRX3O76003 335 aaKnown RBP12.66□□□□□ -0.38
LINC00598-216ENST00000638163 ITGA6P23229 1130 aa12.66□□□□□ -0.38
LINC00598-216ENST00000638163 PDE4AP27815 886 aa12.66□□□□□ -0.38
LINC00598-216ENST00000638163 IGHMBP2P38935 993 aaKnown RBP12.66□□□□□ -0.38
LINC00598-216ENST00000638163 SLC15A2Q16348 729 aa12.66□□□□□ -0.38
LINC00598-216ENST00000638163 PLEKHM2Q8IWE5 1019 aa12.66□□□□□ -0.38
LINC00598-216ENST00000638163 SLC16A10Q8TF71 515 aa12.66□□□□□ -0.38
LINC00598-216ENST00000638163 LRP5O75197 1615 aa12.66□□□□□ -0.38
LINC00598-216ENST00000638163 SALL3Q9BXA9 1300 aa12.65□□□□□ -0.38
LINC00598-216ENST00000638163 PDE1AP54750 535 aa12.65□□□□□ -0.38
LINC00598-216ENST00000638163 R3HDM1Q15032 1099 aaKnown RBP12.65□□□□□ -0.38
LINC00598-216ENST00000638163 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
LINC00598-216ENST00000638163 MPHOSPH8Q99549 860 aa12.65□□□□□ -0.38
LINC00598-216ENST00000638163 UPF2Q9HAU5 1272 aaKnown RBP12.65□□□□□ -0.38
LINC00598-216ENST00000638163 CEP126Q9P2H0 1117 aa12.65□□□□□ -0.38
LINC00598-216ENST00000638163 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
LINC00598-216ENST00000638163 PSDA5PKW4 1024 aaPredicted RBP12.64□□□□□ -0.39
LINC00598-216ENST00000638163 TM4SF1P30408 202 aa12.64□□□□□ -0.39
LINC00598-216ENST00000638163 NFIXQ14938 502 aa12.64□□□□□ -0.39
LINC00598-216ENST00000638163 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
LINC00598-216ENST00000638163 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
LINC00598-216ENST00000638163 LDHAL6AQ6ZMR3 332 aa12.64□□□□□ -0.39
LINC00598-216ENST00000638163 ECHDC1Q9NTX5 307 aa12.64□□□□□ -0.39
LINC00598-216ENST00000638163 APBB1O00213 710 aa12.63□□□□□ -0.39
LINC00598-216ENST00000638163 ZNF827Q17R98 1081 aa12.63□□□□□ -0.39
LINC00598-216ENST00000638163 BACH2Q9BYV9 841 aa12.63□□□□□ -0.39
LINC00598-216ENST00000638163 GREM2Q9H772 168 aa12.63□□□□□ -0.39
LINC00598-216ENST00000638163 CNNM1Q9NRU3 951 aa12.63□□□□□ -0.39
LINC00598-216ENST00000638163 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
LINC00598-216ENST00000638163 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 SASH1O94885 1247 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 LRRFIP1Q32MZ4 808 aaKnown RBP12.62□□□□□ -0.39
LINC00598-216ENST00000638163 ERFEQ4G0M1 354 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
LINC00598-216ENST00000638163 AACSQ86V21 672 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 ANKRD18AQ8IVF6 992 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00598-216ENST00000638163 SIL1Q9H173 461 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 PARP3Q9Y6F1 533 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
LINC00598-216ENST00000638163 DDX60Q8IY21 1712 aaKnown RBP12.62□□□□□ -0.39
LINC00598-216ENST00000638163 RFX7Q2KHR2 1363 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 HIP1O00291 1037 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 MSH5O43196 834 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 CDC45O75419 566 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 SERPINB2P05120 415 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 HCLS1P14317 486 aaPredicted RBP12.61□□□□□ -0.39
LINC00598-216ENST00000638163 ATG9AQ7Z3C6 839 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 COL23A1Q86Y22 540 aaPredicted RBP12.61□□□□□ -0.39
LINC00598-216ENST00000638163 CNTROBQ8N137 903 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
LINC00598-216ENST00000638163 IL1RAPL2Q9NP60 686 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
LINC00598-216ENST00000638163 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 ZNF609O15014 1411 aa12.61□□□□□ -0.39
LINC00598-216ENST00000638163 KLRG2A4D1S0 409 aaPredicted RBP12.6□□□□□ -0.39
LINC00598-216ENST00000638163 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
LINC00598-216ENST00000638163 ZBTB22O15209 634 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 EPB41L2O43491 1005 aaKnown RBP12.6□□□□□ -0.39
LINC00598-216ENST00000638163 SMARCA5O60264 1052 aaPredicted RBP12.6□□□□□ -0.39
LINC00598-216ENST00000638163 IGSF3O75054 1194 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 PDE6BP35913 854 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
LINC00598-216ENST00000638163 CRY2Q49AN0 593 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 CCDC158Q5M9N0 1113 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 PRR5LQ6MZQ0 368 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 AMIGO3Q86WK7 504 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 IL27Q8NEV9 243 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 ANKRD2Q9GZV1 360 aa12.6□□□□□ -0.39
LINC00598-216ENST00000638163 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
LINC00598-216ENST00000638163 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
LINC00598-216ENST00000638163 PDE8BO95263 885 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms