RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 PCDH10Q9P2E7 1040 aa15.51■□□□□ 0.07
SYNGAP1-223ENST00000637671 PGAP2Q9UHJ9 254 aa15.51■□□□□ 0.07
SYNGAP1-223ENST00000637671 RAD17O75943 681 aa15.5■□□□□ 0.07
SYNGAP1-223ENST00000637671 KIAA2012Q0VF49 1180 aa15.5■□□□□ 0.07
SYNGAP1-223ENST00000637671 KDM3BQ7LBC6 1761 aa15.49■□□□□ 0.07
SYNGAP1-223ENST00000637671 H7C1D1 291 aa15.49■□□□□ 0.07
SYNGAP1-223ENST00000637671 SLC10A5Q5PT55 438 aa15.49■□□□□ 0.07
SYNGAP1-223ENST00000637671 SP8Q8IXZ3 490 aa15.49■□□□□ 0.07
SYNGAP1-223ENST00000637671 HUNKP57058 714 aa15.48■□□□□ 0.07
SYNGAP1-223ENST00000637671 DDX46Q7L014 1031 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-223ENST00000637671 TRPM4Q8TD43 1214 aa15.48■□□□□ 0.07
SYNGAP1-223ENST00000637671 CNOT7Q9UIV1 285 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-223ENST00000637671 NFE2L2Q16236 605 aa15.47■□□□□ 0.07
SYNGAP1-223ENST00000637671 HSP90AB3PQ58FF7 597 aa15.47■□□□□ 0.07
SYNGAP1-223ENST00000637671 THUMPD2Q9BTF0 503 aaKnown RBP15.47■□□□□ 0.07
SYNGAP1-223ENST00000637671 MAPK8IP3Q9UPT6 1336 aa15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 HIRAP54198 1017 aaPredicted RBP15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 GRAPQ13588 217 aa15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 TMC4Q7Z404 712 aa15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 USP48Q86UV5 1035 aa15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 MICALL2Q8IY33 904 aa15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 GRAPLQ8TC17 118 aaPredicted RBP15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 PNNQ9H307 717 aaKnown RBP15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 TSPYL4Q9UJ04 414 aa15.46■□□□□ 0.07
SYNGAP1-223ENST00000637671 EIF2S2P20042 333 aaKnown RBP15.45■□□□□ 0.06
SYNGAP1-223ENST00000637671 SAGE1Q9NXZ1 904 aa15.45■□□□□ 0.06
SYNGAP1-223ENST00000637671 HCLS1P14317 486 aaPredicted RBP15.44■□□□□ 0.06
SYNGAP1-223ENST00000637671 KRT26Q7Z3Y9 468 aa15.44■□□□□ 0.06
SYNGAP1-223ENST00000637671 C2orf69Q8N8R5 385 aa15.44■□□□□ 0.06
SYNGAP1-223ENST00000637671 DPF2Q92785 391 aa15.44■□□□□ 0.06
SYNGAP1-223ENST00000637671 CCDC102AQ96A19 550 aa15.44■□□□□ 0.06
SYNGAP1-223ENST00000637671 CASP8AP2Q9UKL3 1982 aa15.44■□□□□ 0.06
SYNGAP1-223ENST00000637671 SH3TC1Q8TE82 1336 aa15.43■□□□□ 0.06
SYNGAP1-223ENST00000637671 YDJCA8MPS7 323 aa15.43■□□□□ 0.06
SYNGAP1-223ENST00000637671 RGMBQ6NW40 437 aa15.43■□□□□ 0.06
SYNGAP1-223ENST00000637671 NLRP10Q86W26 655 aa15.43■□□□□ 0.06
SYNGAP1-223ENST00000637671 GBA2Q9HCG7 927 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-223ENST00000637671 TRMT112Q9UI30 125 aaKnown RBP15.43■□□□□ 0.06
SYNGAP1-223ENST00000637671 TNRC18O15417 2968 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-223ENST00000637671 SHTN1A0MZ66 631 aa15.42■□□□□ 0.06
SYNGAP1-223ENST00000637671 RPS12P25398 132 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-223ENST00000637671 PDIA6Q15084 440 aa15.42■□□□□ 0.06
SYNGAP1-223ENST00000637671 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
SYNGAP1-223ENST00000637671 LRP10Q7Z4F1 713 aa15.42■□□□□ 0.06
SYNGAP1-223ENST00000637671 DCPSQ96C86 337 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-223ENST00000637671 PLEKHF1Q96S99 279 aa15.42■□□□□ 0.06
SYNGAP1-223ENST00000637671 ZIC5Q96T25 663 aa15.42■□□□□ 0.06
SYNGAP1-223ENST00000637671 PSMD14O00487 310 aa15.41■□□□□ 0.06
SYNGAP1-223ENST00000637671 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-223ENST00000637671 AIMP1Q12904 312 aaKnown RBP15.41■□□□□ 0.06
SYNGAP1-223ENST00000637671 PROSER3Q2NL68 480 aa15.41■□□□□ 0.06
SYNGAP1-223ENST00000637671 TBC1D10BQ4KMP7 808 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-223ENST00000637671 SAMD7Q7Z3H4 446 aa15.41■□□□□ 0.06
SYNGAP1-223ENST00000637671 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-223ENST00000637671 DLG5Q8TDM6 1919 aa15.41■□□□□ 0.06
SYNGAP1-223ENST00000637671 FAM155AB1AL88 458 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 ANXA1P04083 346 aa15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 TCIRG1Q13488 830 aa15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 COPS6Q7L5N1 327 aa15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 XAGE3Q8WTP9 111 aa15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 BABAM1Q9NWV8 329 aa15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
SYNGAP1-223ENST00000637671 ANKRD36CQ5JPF3 1778 aa15.39■□□□□ 0.05
SYNGAP1-223ENST00000637671 PDE4DIPQ5VU43 2346 aa15.39■□□□□ 0.05
SYNGAP1-223ENST00000637671 ADM5C9JUS6 153 aa15.39■□□□□ 0.05
SYNGAP1-223ENST00000637671 C6orf229H3BNL8 230 aa15.39■□□□□ 0.05
SYNGAP1-223ENST00000637671 SOX10P56693 466 aa15.39■□□□□ 0.05
SYNGAP1-223ENST00000637671 SULF1Q8IWU6 871 aa15.39■□□□□ 0.05
SYNGAP1-223ENST00000637671 EYA3Q99504 573 aa15.39■□□□□ 0.05
SYNGAP1-223ENST00000637671 DUOX1Q9NRD9 1551 aa15.39■□□□□ 0.05
SYNGAP1-223ENST00000637671 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
SYNGAP1-223ENST00000637671 TRPA1O75762 1119 aa15.38■□□□□ 0.05
SYNGAP1-223ENST00000637671 RBM26Q5T8P6 1007 aaKnown RBP15.38■□□□□ 0.05
SYNGAP1-223ENST00000637671 DLK2Q6UY11 383 aa15.38■□□□□ 0.05
SYNGAP1-223ENST00000637671 NECTIN2Q92692 538 aa15.38■□□□□ 0.05
SYNGAP1-223ENST00000637671 RNF186Q9NXI6 227 aa15.38■□□□□ 0.05
SYNGAP1-223ENST00000637671 LAMB2P55268 1798 aa15.37■□□□□ 0.05
SYNGAP1-223ENST00000637671 ECE2O60344 883 aa15.37■□□□□ 0.05
SYNGAP1-223ENST00000637671 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
SYNGAP1-223ENST00000637671 KIF4BQ2VIQ3 1234 aa15.37■□□□□ 0.05
SYNGAP1-223ENST00000637671 REM2Q8IYK8 340 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-223ENST00000637671 LRRC37AA6NMS7 1700 aa15.37■□□□□ 0.05
SYNGAP1-223ENST00000637671 EGFRP00533 1210 aa15.36■□□□□ 0.05
SYNGAP1-223ENST00000637671 SLC10A3P09131 477 aa15.36■□□□□ 0.05
SYNGAP1-223ENST00000637671 GGA3Q9NZ52 723 aa15.36■□□□□ 0.05
SYNGAP1-223ENST00000637671 G3V3G9 751 aa15.35■□□□□ 0.05
SYNGAP1-223ENST00000637671 RIPK4P57078 832 aa15.35■□□□□ 0.05
SYNGAP1-223ENST00000637671 GPSM2P81274 684 aa15.35■□□□□ 0.05
SYNGAP1-223ENST00000637671 DOK7Q18PE1 504 aa15.35■□□□□ 0.05
SYNGAP1-223ENST00000637671 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
SYNGAP1-223ENST00000637671 CTU1Q7Z7A3 348 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-223ENST00000637671 POLLQ9UGP5 575 aa15.35■□□□□ 0.05
SYNGAP1-223ENST00000637671 SF3B3Q15393 1217 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-223ENST00000637671 PRPF38BQ5VTL8 546 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-223ENST00000637671 PLBD2Q8NHP8 589 aa15.34■□□□□ 0.05
SYNGAP1-223ENST00000637671 CELF1Q92879 486 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-223ENST00000637671 CDCA5Q96FF9 252 aa15.34■□□□□ 0.05
SYNGAP1-223ENST00000637671 RTL9Q8NET4 1388 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms