RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 CTSWP56202 376 aa26.35■■□□□ 1.81
CHRNA7-228ENST00000637519 IL15P40933 162 aaPredicted RBP26.35■■□□□ 1.81
CHRNA7-228ENST00000637519 TTLL11Q8NHH1 800 aa26.35■■□□□ 1.81
CHRNA7-228ENST00000637519 QTRT2Q9H974 415 aaKnown RBP26.35■■□□□ 1.81
CHRNA7-228ENST00000637519 TIMM10P62072 90 aa26.34■■□□□ 1.81
CHRNA7-228ENST00000637519 NEUROD6Q96NK8 337 aa26.34■■□□□ 1.81
CHRNA7-228ENST00000637519 IFIT5Q13325 482 aaKnown RBP26.34■■□□□ 1.81
CHRNA7-228ENST00000637519 EVI5LQ96CN4 794 aa26.34■■□□□ 1.81
CHRNA7-228ENST00000637519 SGSM2O43147 1006 aa26.33■■□□□ 1.81
CHRNA7-228ENST00000637519 ITGA6P23229 1130 aa26.33■■□□□ 1.81
CHRNA7-228ENST00000637519 TAF7LQ5H9L4 462 aa26.33■■□□□ 1.81
CHRNA7-228ENST00000637519 PALD1Q9ULE6 856 aa26.33■■□□□ 1.81
CHRNA7-228ENST00000637519 ZNF609O15014 1411 aa26.32■■□□□ 1.8
CHRNA7-228ENST00000637519 ONECUT3O60422 494 aaPredicted RBP26.32■■□□□ 1.8
CHRNA7-228ENST00000637519 HCLS1P14317 486 aaPredicted RBP26.32■■□□□ 1.8
CHRNA7-228ENST00000637519 ZNF831Q5JPB2 1677 aa26.32■■□□□ 1.8
CHRNA7-228ENST00000637519 SNX21Q969T3 373 aa26.32■■□□□ 1.8
CHRNA7-228ENST00000637519 DIAPH3Q9NSV4 1193 aa26.32■■□□□ 1.8
CHRNA7-228ENST00000637519 NIP7Q9Y221 180 aaKnown RBP eCLIP26.32■■□□□ 1.8
CHRNA7-228ENST00000637519 CIAO1O76071 339 aa26.32■■□□□ 1.8
CHRNA7-228ENST00000637519 CCNL1Q9UK58 526 aaPredicted RBP26.31■■□□□ 1.8
CHRNA7-228ENST00000637519 AMIGO3Q86WK7 504 aa26.3■■□□□ 1.8
CHRNA7-228ENST00000637519 DNAJC2Q99543 621 aaKnown RBP26.3■■□□□ 1.8
CHRNA7-228ENST00000637519 PDE8AO60658 829 aa26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 ATP5JP18859 108 aa26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 RABEP1Q15276 862 aa26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 FAM227BQ96M60 508 aa26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 FSD1Q9BTV5 496 aa26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 ANTXR1Q9H6X2 564 aa26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 CNTNAP4Q9C0A0 1308 aa26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 A0A1B0GUL7 405 aa26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 UTP14AQ9BVJ6 771 aaKnown RBP26.29■■□□□ 1.8
CHRNA7-228ENST00000637519 SBF2Q86WG5 1849 aa26.28■■□□□ 1.8
CHRNA7-228ENST00000637519 BCORQ6W2J9 1755 aa26.28■■□□□ 1.8
CHRNA7-228ENST00000637519 MYH3P11055 1940 aa26.28■■□□□ 1.8
CHRNA7-228ENST00000637519 SH3TC1Q8TE82 1336 aa26.28■■□□□ 1.8
CHRNA7-228ENST00000637519 RIC1Q4ADV7 1423 aa26.28■■□□□ 1.8
CHRNA7-228ENST00000637519 CHGBP05060 677 aa26.27■■□□□ 1.8
CHRNA7-228ENST00000637519 CEP126Q9P2H0 1117 aa26.27■■□□□ 1.8
CHRNA7-228ENST00000637519 GNPATO15228 680 aa26.27■■□□□ 1.8
CHRNA7-228ENST00000637519 NTSR2O95665 410 aa26.27■■□□□ 1.8
CHRNA7-228ENST00000637519 ANKRD18BA2A2Z9 1011 aa26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 NMIQ13287 307 aaPredicted RBP26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 LSG1Q9H089 658 aaKnown RBP26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 ADORA1P30542 326 aa26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 LDHAL6AQ6ZMR3 332 aa26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 BICDL1Q6ZP65 573 aa26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 GPR108Q9NPR9 543 aa26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 FOXD4L1Q9NU39 408 aa26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 SRP68Q9UHB9 627 aaKnown RBP26.26■■□□□ 1.79
CHRNA7-228ENST00000637519 RAD50Q92878 1312 aa26.25■■□□□ 1.79
CHRNA7-228ENST00000637519 A0A0D9SFI3 127 aa26.24■■□□□ 1.79
CHRNA7-228ENST00000637519 PARP10Q53GL7 1025 aa26.24■■□□□ 1.79
CHRNA7-228ENST00000637519 DDX46Q7L014 1031 aaKnown RBP26.24■■□□□ 1.79
CHRNA7-228ENST00000637519 K7ELQ4 463 aaPredicted RBP26.24■■□□□ 1.79
CHRNA7-228ENST00000637519 ZNF652Q9Y2D9 606 aa26.24■■□□□ 1.79
CHRNA7-228ENST00000637519 RIPOR2Q9Y4F9 1068 aa26.24■■□□□ 1.79
CHRNA7-228ENST00000637519 MCCP23508 829 aa26.23■■□□□ 1.79
CHRNA7-228ENST00000637519 PTH1RQ03431 593 aa26.23■■□□□ 1.79
CHRNA7-228ENST00000637519 HAUS7Q99871 368 aa26.23■■□□□ 1.79
CHRNA7-228ENST00000637519 BCL2L12Q9HB09 334 aa26.23■■□□□ 1.79
CHRNA7-228ENST00000637519 CNNM1Q9NRU3 951 aa26.23■■□□□ 1.79
CHRNA7-228ENST00000637519 DDX60Q8IY21 1712 aaKnown RBP26.23■■□□□ 1.79
CHRNA7-228ENST00000637519 METTL24Q5JXM2 366 aa26.23■■□□□ 1.79
CHRNA7-228ENST00000637519 SEC31BQ9NQW1 1179 aa26.23■■□□□ 1.79
CHRNA7-228ENST00000637519 LY75O60449 1722 aa26.22■■□□□ 1.79
CHRNA7-228ENST00000637519 USPL1Q5W0Q7 1092 aa26.22■■□□□ 1.79
CHRNA7-228ENST00000637519 RUFY2Q8WXA3 655 aa26.21■■□□□ 1.79
CHRNA7-228ENST00000637519 FBXO3Q9UK99 471 aa26.21■■□□□ 1.79
CHRNA7-228ENST00000637519 SCN7AQ01118 1682 aa26.21■■□□□ 1.79
CHRNA7-228ENST00000637519 RPS6KA4O75676 772 aa26.21■■□□□ 1.79
CHRNA7-228ENST00000637519 HSPA4P34932 840 aa26.21■■□□□ 1.79
CHRNA7-228ENST00000637519 TBC1D9BQ66K14 1250 aa26.21■■□□□ 1.79
CHRNA7-228ENST00000637519 KIAA1211Q6ZU35 1233 aa26.21■■□□□ 1.79
CHRNA7-228ENST00000637519 RC3H1Q5TC82 1133 aaKnown RBP26.2■■□□□ 1.78
CHRNA7-228ENST00000637519 XAGE2Q96GT9 111 aa26.2■■□□□ 1.78
CHRNA7-228ENST00000637519 BRWD3Q6RI45 1802 aa26.19■■□□□ 1.78
CHRNA7-228ENST00000637519 GOLIM4O00461 696 aa26.19■■□□□ 1.78
CHRNA7-228ENST00000637519 PHF14O94880 888 aa26.19■■□□□ 1.78
CHRNA7-228ENST00000637519 LRRC4BQ9NT99 713 aa26.19■■□□□ 1.78
CHRNA7-228ENST00000637519 NFKBIBQ15653 356 aa26.19■■□□□ 1.78
CHRNA7-228ENST00000637519 CLEC4GQ6UXB4 293 aa26.19■■□□□ 1.78
CHRNA7-228ENST00000637519 LRP5O75197 1615 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 COL4A1P02462 1669 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 SLFNL1Q499Z3 407 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 ERFEQ4G0M1 354 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 ZNF589Q86UQ0 364 aaPredicted RBP26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 UPF3BQ9BZI7 483 aaKnown RBP26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 BCL11BQ9C0K0 894 aaPredicted RBP26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 TAF1LQ8IZX4 1826 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 NEK4P51957 841 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 C3orf67Q6ZVT6 689 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 RASEFQ8IZ41 740 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 HELBQ8NG08 1087 aaPredicted RBP26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 AKAP2Q9Y2D5 859 aa26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 RTCBQ9Y3I0 505 aaKnown RBP26.18■■□□□ 1.78
CHRNA7-228ENST00000637519 HIP1O00291 1037 aa26.17■■□□□ 1.78
CHRNA7-228ENST00000637519 IFIT1P09914 478 aaKnown RBP26.17■■□□□ 1.78
CHRNA7-228ENST00000637519 ATP2B3Q16720 1220 aa26.17■■□□□ 1.78
CHRNA7-228ENST00000637519 VGLL2Q8N8G2 317 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms