RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 JADE2Q9NQC1 790 aa7.49□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC171Q6TFL3 1326 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC196A0A1B0GTZ2 297 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 SHTN1A0MZ66 631 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 RIOK3O14730 519 aaKnown RBP7.48□□□□□ -1.21
SCN2A-216ENST00000637367 SPTY2D1Q68D10 685 aaPredicted RBP7.48□□□□□ -1.21
SCN2A-216ENST00000637367 ANKRD13DQ6ZTN6 518 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 KCNH5Q8NCM2 988 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 KLHDC4Q8TBB5 520 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 MKNK2Q9HBH9 465 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 VAT1LQ9HCJ6 419 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 ARFGAP3Q9NP61 516 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 LMBRD1Q9NUN5 540 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 NDUFB9Q9Y6M9 179 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 UGGT2Q9NYU1 1516 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 ATP2C2O75185 946 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 SSR1P43307 286 aaKnown RBP7.48□□□□□ -1.21
SCN2A-216ENST00000637367 SPECC1Q5M775 1068 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 IQCA1Q86XH1 822 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 GPATCH11Q8N954 259 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 ZNF397Q8NF99 534 aaPredicted RBP7.48□□□□□ -1.21
SCN2A-216ENST00000637367 TIGD1Q96MW7 591 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 LZTFL1Q9NQ48 299 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCN2A-216ENST00000637367 HMG20BQ9P0W2 317 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 TRIM35Q9UPQ4 493 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC194A0A1B0GVG4 234 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 GRM8O00222 908 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 YEATS4O95619 227 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 PAFAH1B1P43034 410 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 RBM5P52756 815 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCN2A-216ENST00000637367 HS1BP3Q53T59 392 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 CTR9Q6PD62 1173 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC150Q8NCX0 1101 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 LRRC59Q96AG4 307 aaKnown RBP7.48□□□□□ -1.21
SCN2A-216ENST00000637367 PUF60Q9UHX1 559 aaKnown RBP7.48□□□□□ -1.21
SCN2A-216ENST00000637367 KIF14Q15058 1648 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 MSH6P52701 1360 aa7.48□□□□□ -1.21
SCN2A-216ENST00000637367 STARD3NLO95772 234 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 TMEM132AQ24JP5 1023 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 AMOTQ4VCS5 1084 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC178Q5BJE1 867 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 FKBP15Q5T1M5 1219 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 OTUD7BQ6GQQ9 843 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 ANKLE2Q86XL3 938 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 NCOA7Q8NI08 942 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 BBXQ8WY36 941 aaPredicted RBP7.47□□□□□ -1.21
SCN2A-216ENST00000637367 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.47□□□□□ -1.21
SCN2A-216ENST00000637367 RSPH14Q9UHP6 348 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 TTC21BQ7Z4L5 1316 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 MACROD2A1Z1Q3 448 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 MAP9Q49MG5 647 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 CCDC129Q6ZRS4 1044 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 PIK3C2GO75747 1445 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 GRIN2AQ12879 1464 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 PNMA6EA0A0J9YXQ4 647 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 PTPDC1A2A3K4 754 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 CAVIN2O95810 425 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 USP8P40818 1118 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 UBA7P41226 1012 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 CD109Q6YHK3 1445 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 SPTLC2O15270 562 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 SEPT7Q16181 437 aaKnown RBP7.47□□□□□ -1.21
SCN2A-216ENST00000637367 DYDC1Q8WWB3 177 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 INTS4Q96HW7 963 aaKnown RBP7.47□□□□□ -1.21
SCN2A-216ENST00000637367 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
SCN2A-216ENST00000637367 GOPCQ9HD26 462 aa7.47□□□□□ -1.21
SCN2A-216ENST00000637367 SOS1Q07889 1333 aaPredicted RBP7.46□□□□□ -1.21
SCN2A-216ENST00000637367 TMCO5BA8MYB1 307 aa7.46□□□□□ -1.21
SCN2A-216ENST00000637367 AKR1B10O60218 316 aa7.46□□□□□ -1.21
SCN2A-216ENST00000637367 RHOXF2BP0C7M4 288 aa7.46□□□□□ -1.21
SCN2A-216ENST00000637367 PRPF4BQ13523 1007 aaKnown RBP7.46□□□□□ -1.21
SCN2A-216ENST00000637367 DNAJC21Q5F1R6 531 aaKnown RBP7.46□□□□□ -1.21
SCN2A-216ENST00000637367 TCERG1LQ5VWI1 586 aa7.46□□□□□ -1.21
SCN2A-216ENST00000637367 RHOXF2Q9BQY4 288 aa7.46□□□□□ -1.21
SCN2A-216ENST00000637367 UTP14AQ9BVJ6 771 aaKnown RBP7.46□□□□□ -1.21
SCN2A-216ENST00000637367 TMOD3Q9NYL9 352 aa7.46□□□□□ -1.21
SCN2A-216ENST00000637367 A0A1W2PP64 1363 aa7.46□□□□□ -1.21
SCN2A-216ENST00000637367 ZBTB43O43298 467 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 CD2BP2O95400 341 aaKnown RBP7.46□□□□□ -1.22
SCN2A-216ENST00000637367 ZNF76P36508 570 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 IFFO1Q0D2I5 559 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 MCMDC2Q4G0Z9 681 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 FAM227BQ96M60 508 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 RTL1A6NKG5 1358 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 MPHOSPH10O00566 681 aaKnown RBP7.46□□□□□ -1.22
SCN2A-216ENST00000637367 TRIM21P19474 475 aaKnown RBP7.46□□□□□ -1.22
SCN2A-216ENST00000637367 NOP2P46087 812 aaKnown RBP7.46□□□□□ -1.22
SCN2A-216ENST00000637367 PPARDQ03181 441 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 HELBQ8NG08 1087 aaPredicted RBP7.46□□□□□ -1.22
SCN2A-216ENST00000637367 KCNG4Q8TDN1 519 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 DHX58Q96C10 678 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 TRIM47Q96LD4 638 aa7.46□□□□□ -1.22
SCN2A-216ENST00000637367 CWC25Q9NXE8 425 aaPredicted RBP7.46□□□□□ -1.22
SCN2A-216ENST00000637367 GOLGA6L7A0A1B0GV03 622 aa7.45□□□□□ -1.22
SCN2A-216ENST00000637367 ANKRD18BA2A2Z9 1011 aa7.45□□□□□ -1.22
SCN2A-216ENST00000637367 PRC1O43663 620 aa7.45□□□□□ -1.22
SCN2A-216ENST00000637367 CAPN2P17655 700 aa7.45□□□□□ -1.22
SCN2A-216ENST00000637367 ZNF445P59923 1031 aa7.45□□□□□ -1.22
SCN2A-216ENST00000637367 RRAGBQ5VZM2 374 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms